| New model in OGS2.0 | DPOGS214281 |
|---|---|
| Genomic Position | scaffold60:- 133906-137481 |
| See gene structure | |
| CDS Length | 3495 |
| Paired RNAseq reads | 103 |
| Single RNAseq reads | 259 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005993 (0.0) |
| Best Drosophila hit | CG5195 (6e-151) |
| Best Human hit | slit homolog 3 protein precursor (4e-26) |
| Best NR hit (blastp) | tartan/capricious-like protein [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | tartan/capricious-like protein [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005515 protein binding |
| InterPro families | IPR003591 Leucine-rich repeat, typical subtype IPR001611 Leucine-rich repeat |
| Orthology group | MCL16220 |
Nucleotide sequence:
ATGGTCGGACGTGCTACAAGAGATCTTCCGATGCTCTCTACTTTAAATTTAAGCGATAAT
ATTATCACAAAATTAAACGAAGCAGCCTTCGTTGATCTTCCAATGTTAGAAGTTTTATAT
TTAACAAATAATAACATTAATATTATTCATCATGGAGCCTTTTACAGAGTAGCTAAATTG
AGAAAGGTAGATCTGAACTATAATGAAATAATAAGAATACATCCTGAATCATTTCTACAA
CAATCTGGTAGCGGAGTTGAAGATCTGTCTTTAATTGGCAACCAAATCATGCACATATCT
GAATTTAGATCGCTACTCGATGCATTACCTCGTTTGAGATACTTGGATATGAGTGAGAAT
TTATTACAAGAGATTCCCAGAGGAGCATTGAGAGGACATCCGAGTCTTGAAAGATTACAT
TTGAACACAAACAATATCAAGTTTATAGATAAAGATGCATTTTTAGCTATGCCAGCCTTA
AGAGAACTGCATCTGAGCAATAATTCCTTGAATGATTTAAACGAAGGTCCGTTTTGGAAT
TTACCGGCATTAAAAGGTTTAGATTTGTCTTATAATTATTTTCAGCGTTTACAGCCAAAA
TTATTGTTCAACCTTCCAGCATTGAGAAGAATTAATCTAAGTAATAATCAACTGACTATA
ATAGATCCGATTACTTTCATGGAAACACCTCTATTGGAATATGTCAATATATCGGGCAAT
AGTTTAGTATCCATACATCCCGCAACTTTTAGAAATTTACCAAACTTATACGAATTGGAT
GCCAGTTCAAACAGACTTGTCGAATTTGTGCCCGGATTACCCAGAGGGCTAGAACAGTTG
TATTTAAATAAAAATCAAATAACGACTTTACCAATAGCACCATCTCCAGATTTGGATTTA
CCTTCTCTGCGAACATTAGATATATCGAGCAACGGTATCCAAAAGATTTCACATGGAGGA
ATGAAAACATTACATAATTTGCGACGGCTCTACATGAAACGCAATGGTGTACGACAAATA
GACATTGGGACTTTTAGTAATCTAGAACGCCTGGAAGAGTTGGACTTAAGTCACAATCAG
ATTATAAGCATTGACCCAAAGAGTTTTTCAAATCTGGCATACCTCAAGCAAATCAATTTG
TTAGGAAATAATATAGAAAATCTTGATTTTACGACAATTCAAAACAATGGTGTATTGTCA
ACAGTAGATTTTAGTAAGAATAAGATAAAAAGCATTAACCCTGTTACAATGAGCAAGGGT
TTAAAAGTAGAAATATTGAATATTTCTATGAACAATCTCCATGAACTTCCCGGTAATCTT
AACATGTTGTCGACACTTAAAACGTTAGATTTAAGTAACAACTTCATCAAAAGTTTTGAT
GGCAATATTATTAATAGCATACATACTCTTGAAACAATTAAAATGCACAGAAATAGAATT
GTTGAACTACGACCAGGTACCTTCAGAGATTTAATTAACCTAGGAACCATTGATTTGGAA
AACAACCAACTGGAGGCGATCCATTCTCTTGCTATCGCTAGCCTTCCAAACTTAGTGTCA
ATCTATTTGAGCAATAACCACATTATTGATATTCCTGATCGCGCATTTTCCAATTTACCC
AAATTACGTGTGATTGATTTACAAGGAAACAGACTGCAGTTCATATCAATGAGAGCTTTC
GACAGTATACCTTTGGTGCAGTATTTAAATTTGAGTAACAATCAGATAACTACTTTGGAT
AATTTAGGAATTAGACCACTTATGTCCTTAGAAGTGTTAGATCTGAGTTTTAACAGGATA
ACGAGAATCACAAAAGAATCTTTCAAATATATGGAGTGGCTGGTCGAACTCAATCTAGAT
AACAATAACATATGCTACATCACTAACCAACCATTTGACTATATGCCGCGCTTAAAAGTC
CTGTCGTTGCGGAATAACAAGTTGCATTCTGTTCATGAGAATAATTTTGCAAAGTTGAGA
AGTAACATTGCTATCTTAGATATTGACGGCAACCCACTTGTTTGTAATTGTGCAATAATT
TGGCTGAAGTCCTGGCTTACGGAATCAACTTCAATAGGACCAAAATGTTCAGATGGTACG
TACGTAAAGGAAATGCCATTTTCCAAAAGTGACTGCGATAATATTCCAATTCAAACACAA
GACCCGAACTCATGTTTGTCATATGAAAATGAGGCGTTATTGCCTAATCTGCAAACATCT
CAAGTTTTCTCTTCATTGGATAAAATTAAAGATTACGGTACACACATCAAACACAACTAC
AATGGGAATAAATTAAGTAATCGTCCGTTACCAGAGGAATCCGAATACTTTTACGATGAA
TACGTAGATTACCCTTATAATGAAACATTGCTTGAGAATATAAACAATGAATTCAAAGTC
ACGAACAAGTCAATGGAAATCGCAACAAGCACACCTTCAAATCAAATCGGAACAATTAAC
AGAACGAACCTTAAAAGTGGGGTAGCTGTTAAACTTCCTACAAGTGGATTCACTTTTTTT
GGCCTTCCACTTCCTTCTCTAGATATGAATAAACTGTTAAATACTGGTCGCAAAATTGAT
TTGTTTGAAAATAAGAACAGTCAGAAACACGTGAAAAATTATCAAGTCACAGAAGCTCCT
CGATTCGAAACTGGAGGTTTTTCCCCTATGCTCCCAGCCACTTCAGCAGGTTTCAAGCCA
ATACCAAACCCAGCTTTAAATGTATCCCAAATGGCTGAGCATAGTATTGTAAAAGTTGAC
CAAAACAATAAAGCTTTAAATAACTTATCGCCTATGGGAAAGGTTTTTAACAATACAAGT
CACAAAAAAATTAAGAGCGAATTTCATGAGCTTGAAGCATACCATAATGATGATAACAAG
ACTCAAATAGCTTATAACAGAACTAAAAACATAGAAGAACAAGATATTACTCCAATAAAT
ATAAGTAAATATAATCTTATGGAAACAAACATGACGGTTACACAAGTTACAGAAAAGGAA
ATGATCATAACTACAGATGTAATAAACACAGATTTGTCACTACAGGCATGGATAGAAACC
AGTAGCATGCTACCATCCTCAACTACCACATCATTACCAATTGTCAAACACGTGGATAGT
GAACCCACTGCTCTTTCATCCACCCTGGACTCTAACATTGAAGATTTTACCAAAAATCAT
AGCAGAACAGCAACAATAACAAAAGTGGTTTTACCTCATGCTGAGCATTACGATCTGCGA
CATAATTATGCACCAGTTATGAATAGGGAAGCTAAAACACAATTTTTTGAGGTAGCTAGT
ACTCATAATAAGGTGAAGTCAAATGATGACAATGACTGGTATTATAAGAATTACAATAAA
ACAAACATAGACCCATATATTGATCCAGTCATCCAAACTTCAAGTAGCTACAAACTTTTT
TGTTATCAACCTACAATAATATTGACAATTACCATGACTGTATTAAACAATTTAAACTTA
TATATAAAGTTATAG
Protein sequence:
MVGRATRDLPMLSTLNLSDNIITKLNEAAFVDLPMLEVLYLTNNNINIIHHGAFYRVAKL
RKVDLNYNEIIRIHPESFLQQSGSGVEDLSLIGNQIMHISEFRSLLDALPRLRYLDMSEN
LLQEIPRGALRGHPSLERLHLNTNNIKFIDKDAFLAMPALRELHLSNNSLNDLNEGPFWN
LPALKGLDLSYNYFQRLQPKLLFNLPALRRINLSNNQLTIIDPITFMETPLLEYVNISGN
SLVSIHPATFRNLPNLYELDASSNRLVEFVPGLPRGLEQLYLNKNQITTLPIAPSPDLDL
PSLRTLDISSNGIQKISHGGMKTLHNLRRLYMKRNGVRQIDIGTFSNLERLEELDLSHNQ
IISIDPKSFSNLAYLKQINLLGNNIENLDFTTIQNNGVLSTVDFSKNKIKSINPVTMSKG
LKVEILNISMNNLHELPGNLNMLSTLKTLDLSNNFIKSFDGNIINSIHTLETIKMHRNRI
VELRPGTFRDLINLGTIDLENNQLEAIHSLAIASLPNLVSIYLSNNHIIDIPDRAFSNLP
KLRVIDLQGNRLQFISMRAFDSIPLVQYLNLSNNQITTLDNLGIRPLMSLEVLDLSFNRI
TRITKESFKYMEWLVELNLDNNNICYITNQPFDYMPRLKVLSLRNNKLHSVHENNFAKLR
SNIAILDIDGNPLVCNCAIIWLKSWLTESTSIGPKCSDGTYVKEMPFSKSDCDNIPIQTQ
DPNSCLSYENEALLPNLQTSQVFSSLDKIKDYGTHIKHNYNGNKLSNRPLPEESEYFYDE
YVDYPYNETLLENINNEFKVTNKSMEIATSTPSNQIGTINRTNLKSGVAVKLPTSGFTFF
GLPLPSLDMNKLLNTGRKIDLFENKNSQKHVKNYQVTEAPRFETGGFSPMLPATSAGFKP
IPNPALNVSQMAEHSIVKVDQNNKALNNLSPMGKVFNNTSHKKIKSEFHELEAYHNDDNK
TQIAYNRTKNIEEQDITPINISKYNLMETNMTVTQVTEKEMIITTDVINTDLSLQAWIET
SSMLPSSTTTSLPIVKHVDSEPTALSSTLDSNIEDFTKNHSRTATITKVVLPHAEHYDLR
HNYAPVMNREAKTQFFEVASTHNKVKSNDDNDWYYKNYNKTNIDPYIDPVIQTSSSYKLF
CYQPTIILTITMTVLNNLNLYIKL