| New model in OGS2.0 | DPOGS210660 |
|---|---|
| Genomic Position | scaffold635:+ 63969-65700 |
| See gene structure | |
| CDS Length | 1020 |
| Paired RNAseq reads | 547 |
| Single RNAseq reads | 1514 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001805 (2e-127) |
| Best Drosophila hit | mitochondrial ribosomal protein S35 (2e-83) |
| Best Human hit | 28S ribosomal protein S35, mitochondrial isoform 1 precursor (4e-64) |
| Best NR hit (blastp) | PREDICTED: similar to GA15241-PA [Tribolium castaneum] (8e-92) |
| Best NR hit (blastx) | PREDICTED: similar to GA15241-PA [Tribolium castaneum] (2e-90) |
| GeneOntology terms | GO:0005763 mitochondrial small ribosomal subunit GO:0006412 translation GO:0003735 structural constituent of ribosome |
| InterPro families | IPR019349 Ribosomal protein S24/S35, mitochondrial, conserved domain |
| Orthology group | MCL14041 |
Nucleotide sequence:
ATGAGTTTATTTATTCGTAATTACAAGCCGGGTAGCGTGTACAACGCTCAGATAATATGG
CGTTACCACTCAAATAAAGTTGAAATGGCCAAGAAAGAGGATGAAGAAGAGTTCAGAGTA
TTGGACATCCTGAAGACTAGAACAAGATTGCAAAGGAAAGTGACCAGGAGAGCTGACATA
CAGCCGGATAGATCGGAAAAAATGAAGACAGATCAGAATTGGGGTAACGTGTGGCCGGGC
CCGAGATCATTCCACCCATCATCGGTCCCGCTGCCACTGAGGCAAGGATATGTCCCGAAA
GGCCAGGCCCCACCTGGAAAAAAAGCTAACGCCGAACTAATGAAAGTCCCCAACTTCCTT
CACCTAACGCCTCCGGTGATAAAAATGCAATGTGAAGCTATAAAAAAATTCTGCACACCC
TGGCCCGAACTGCTGAACAATGAGGAAGCTATCGAACAGAACTACCCGGTAGAAATCATC
ACATCAGATTACTGTCATGCGAGCCCAACTATACGGAATCCATTATCAAGAATAGCGACT
CTCAGGGTCAAATTGTCCGATCTCAAGTTAGATAAGCACGCCAGAGACAAATTCCTAAGA
TTGGTCGGTGATAAATATAATGAGGGTACCGATTTGGTGACCATCACAGCCGATAGATGT
CCGGTTAGGAAACAGAATTTGGATTACGTCAACTATCTACTGACAGCGTGTTATTATGAG
AGCTGGAACGTTGAAGATTGGGAGAAAGATAAGGCTCTAGAGGATATGGAGTATTATGAT
TTTGATCAGAATCCATCTAAAGCTAATCTGGTGGCCTGGTTTATGAGGGTGTCGAAGAAA
GGTGACCTGACTGATGATGAGGTCAAGGCGTTTGATGTGAGTAATATACCGAACGGCCCA
GAATATAAGAAGGCCGTCTCTGATTTGTTCAATAACTCAGAAAGTGATCAAACACTTGAA
GATTATGATGCTGCAGTCAGGAAATTGCTCGGTCTGCCCGAGAAGAAAGTACTACAATGA
Protein sequence:
MSLFIRNYKPGSVYNAQIIWRYHSNKVEMAKKEDEEEFRVLDILKTRTRLQRKVTRRADI
QPDRSEKMKTDQNWGNVWPGPRSFHPSSVPLPLRQGYVPKGQAPPGKKANAELMKVPNFL
HLTPPVIKMQCEAIKKFCTPWPELLNNEEAIEQNYPVEIITSDYCHASPTIRNPLSRIAT
LRVKLSDLKLDKHARDKFLRLVGDKYNEGTDLVTITADRCPVRKQNLDYVNYLLTACYYE
SWNVEDWEKDKALEDMEYYDFDQNPSKANLVAWFMRVSKKGDLTDDEVKAFDVSNIPNGP
EYKKAVSDLFNNSESDQTLEDYDAAVRKLLGLPEKKVLQ