| New model in OGS2.0 | DPOGS213619 |
|---|---|
| Genomic Position | scaffold1176:+ 1099-4146 |
| See gene structure | |
| CDS Length | 708 |
| Paired RNAseq reads | 636 |
| Single RNAseq reads | 2493 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011681 (1e-82) |
| Best Drosophila hit | CG6707, isoform C (6e-62) |
| Best Human hit | transmembrane protein 55B isoform 1 (6e-40) |
| Best NR hit (blastp) | PREDICTED: similar to CG6707-PA, isoform A [Apis mellifera] (2e-91) |
| Best NR hit (blastx) | PREDICTED: similar to CG6707-PA, isoform A [Apis mellifera] (3e-72) |
| GeneOntology terms | GO:0005768 endosome GO:0016787 hydrolase activity GO:0016021 integral to membrane GO:0005765 lysosomal membrane GO:0016020 membrane GO:0031902 late endosome membrane |
| InterPro families | IPR019178 Transmembrane protein 55A/B |
| Orthology group | MCL13461 |
Nucleotide sequence:
ATGGGTGACGGACAAAGTGAAAATCAACCATTGTTGAGGGATGAGGATGAAAATGTCAGT
ACTATTTCGCCGATCGGCCCTGATGAGTTGCCTCCACCTTACCAGCAGGCTGGGATGCCT
ATGGTTACATGTCGCGTTTGTCAGGCTATGATTGATATATCTGGCAAGAGAGAACAACAC
GTCGTCAAATGCTCAGAGTGTAATGAAGCTACGCCAATCAGAAACGCTCCGCCGGGCAAA
AAGTACGTGCGTTGTCCGTGCAACTGCCTGCTGATATGCAAGTCCTCGTCGCAACGGATC
GCGTGCCCTCGGGCTGACTGCAAGCGCATCATCAACCTAGCGCCGTCCCCAGTGACCCCG
CCCGTGCCCACTCTCCCCGGCATGTGCAGGGTCATGTGCGCACATTGCCAGGACACCTTC
TTGTACCAGATGTTAAAGAACGCGCCGGTCCGCTGTCCCCATTGTCGTAAAGTATCGTCA
GTTGGTCCCCGCATGGCGCGCGTCCGCGGCACCATATTCGCCCTGCTCGCTCTCTTGTTC
TTCGCGATCGCTCTAGGCGTGACCCTGGGGACCCTGTCCGCCGCTAAGACCCACGGCGGC
GGCGTCTACGTGGCCTATGTGGGCGCCTTCTTAGTAGCGCTGCTGCTCGCCAGCCGCGCC
GTCTACTACTTCGCCATGAAGCACAGCACTATCGAGGGTCCCATGTAA
Protein sequence:
MGDGQSENQPLLRDEDENVSTISPIGPDELPPPYQQAGMPMVTCRVCQAMIDISGKREQH
VVKCSECNEATPIRNAPPGKKYVRCPCNCLLICKSSSQRIACPRADCKRIINLAPSPVTP
PVPTLPGMCRVMCAHCQDTFLYQMLKNAPVRCPHCRKVSSVGPRMARVRGTIFALLALLF
FAIALGVTLGTLSAAKTHGGGVYVAYVGAFLVALLLASRAVYYFAMKHSTIEGPM