| New model in OGS2.0 | DPOGS211949 |
|---|---|
| Genomic Position | scaffold127:+ 195653-196632 |
| See gene structure | |
| CDS Length | 786 |
| Paired RNAseq reads | 550 |
| Single RNAseq reads | 1354 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000898 (1e-44) |
| Best Drosophila hit | CG10754 (1e-78) |
| Best Human hit | splicing factor 3A subunit 2 (8e-71) |
| Best NR hit (blastp) | GK16828 [Drosophila willistoni] (4e-108) |
| Best NR hit (blastx) | U2 small nuclear ribonucleoprotein, putative [Aedes aegypti] (2e-89) |
| GeneOntology terms | GO:0000398 nuclear mRNA splicing, via spliceosome GO:0005681 spliceosomal complex GO:0005686 U2 snRNP GO:0008270 zinc ion binding GO:0003676 nucleic acid binding GO:0007052 mitotic spindle organization GO:0071011 precatalytic spliceosome GO:0071013 catalytic step 2 spliceosome |
| InterPro families | IPR000690 Zinc finger, C2H2-type matrin IPR003604 Zinc finger, U1-type |
| Orthology group | MCL13279 |
Nucleotide sequence:
ATGGATTTTCAAAACCGCCCTGGTGGTAAAACCGGCGGTGGTGGTCACCGCAGTACCAGG
CTTTCGTTCCGAGATCGGCGGGAGCGTTTGCGACAGCTCGCTTTAGAAACAATTGACTTA
AATAAGGATCCTTATTTTATGAAAAATCATTTAGGTTCTTATGAGTGCAAGTTATGTTTG
ACACTCCACAATAATGAGGGCAGCTATTTAGCCCACACTCAAGGCAAGAAACATCAAGCT
AACTTAGCTCGAAGAGCAGCCAAAGAGGCAAAAGAAGCTCCACAGCAATTAGCACCAGAG
AAGCCGAGGATTGAGCCGAAGAAGTTTGTTAAGATTGGTCGTCCTGGTTATAGAGTTACT
AAACAAAAGGATCAAGAGAACGGACAGCAAAGTCTACTCTTTCAAGTTGATTATCCAGAA
ATAGCAGAAGGTGTCCAACCAAGACATCGCTTCATGTCAGCCTATGAGCAGAAAATTGAG
CCTCCAGACCGAAGGTGGCAGTACTTGCTCTTTGCAGCGGAACCATATGAGACAATAGCT
TTCAAAGTGCCAAGTCGAGAGGTGGAGAAGCATGATGCAAAGTTCTGGACACATTGGAAC
AAAGATACAAAGCAATTCTTCTTACAATTTGCATTCAAGATGGAACCTCTGAGAATGCCA
CCACCCCCGGCTAAGATGTGGGAAAACCATGGCATCCGTTTACCACCACCTCCCGGGGCT
CCAATGATGGGGGTGCCACCTCCACCCCCACTGCTGCCGGTTCCCCCGCCGCCCCCCTCC
ATGTAA
Protein sequence:
MDFQNRPGGKTGGGGHRSTRLSFRDRRERLRQLALETIDLNKDPYFMKNHLGSYECKLCL
TLHNNEGSYLAHTQGKKHQANLARRAAKEAKEAPQQLAPEKPRIEPKKFVKIGRPGYRVT
KQKDQENGQQSLLFQVDYPEIAEGVQPRHRFMSAYEQKIEPPDRRWQYLLFAAEPYETIA
FKVPSREVEKHDAKFWTHWNKDTKQFFLQFAFKMEPLRMPPPPAKMWENHGIRLPPPPGA
PMMGVPPPPPLLPVPPPPPSM