New model in OGS2.0 | DPOGS211958  |
---|---|
Genomic Position | scaffold127:+ 308842-313897 |
See gene structure | |
CDS Length | 2718 |
Paired RNAseq reads   | 48 |
Single RNAseq reads   | 146 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000907 (1e-122) |
Best Drosophila hit   | no mechanoreceptor potential B, isoform C (1e-48) |
Best Human hit | intraflagellar transport protein 88 homolog isoform 2 (1e-59) |
Best NR hit (blastp)   | tetratricopeptide repeat protein 10, tpr10, putative [Pediculus humanus corporis] (2e-107) |
Best NR hit (blastx)   | hypothetical protein BRAFLDRAFT_208090 [Branchiostoma floridae] (3e-71) |
GeneOntology terms    | GO:0005930 axoneme GO:0005932 microtubule basal body GO:0072019 proximal convoluted tubule development GO:0005488 binding GO:0042462 eye photoreceptor cell development GO:0035058 sensory cilium assembly GO:0045494 photoreceptor cell maintenance GO:0001539 ciliary or flagellar motility GO:0042384 cilium assembly GO:0007368 determination of left/right symmetry GO:0042073 intraflagellar transport GO:0019861 flagellum GO:0005929 cilium |
InterPro families    | IPR019734 Tetratricopeptide repeat IPR013026 Tetratricopeptide repeat-containing IPR001440 Tetratricopeptide TPR-1 IPR011990 Tetratricopeptide-like helical |
Orthology group | MCL14521 |
Nucleotide sequence:
ATGTTGGGGTCGAGACACGGCGTGTCCCGGCAGGGAGGTTTCAAGCCGCCCAGGACTGCC
GTGGTTATCGACGATGAAGACGAATTATATAAAGGATTCAACGAGGTGTCCCCGGCTCTG
GACACCAAGACCCTCCGAGAGGATCAGGTGTTCCAGCAGACCATGCGAACTGCCAACGTA
GGAAGGCAGGCCGCGAGCAGGATGGGCACCGGCATGTTCCGCGTGGGGACGGTGAGTGTG
CGCGGCGCCCGGACGGGTTCAGCTCGACCCGTGACGGCGCTGCGGGCCGCAGGGTACTCC
TCGGGCAAGGACGCGCCCAGAGACGAGCGGAAGGAGGACACGATTGAAGACAAAGTAAAG
CAAATGGAAGCGAAGATCATGACCCTGGTCGAGGAATCGTGCGTGCTGGTCGCCAGGAGA
GACACGGACGACGAGAACGACAGCACGAGAGAACAAAATTTAAGTCAGGCGTTAGCGAAA
GCACAAGAAGCATCAACCCTGGAGAGACAGTTGATAAGAATGCAGGAGCAAGCCAATTTG
GGCGACTCGCATAATTTGGATTTGACGTTTGCCGTACTTTGTAATCTGGCCGACCAGTAC
GCCCTCAATGAAATGTACACTGAGGCCCTTAACACTTACCAACTTCTCACCAGGAACAAA
CTCTTTCCTCACGCAAATAGACTTAAGGTCAACATGGGAAATATACATTTCAAGATGGGC
GAACATCCGAAAGCATTGAAACTTTATCGAATGGCTCTGGACCAAACTCCTACAGCGGAG
AAAGACCTGAGAATGAAAGTGATGCATAATATTGGTCTCCTGCTCGTGCGGATGGGCAAG
TTTCGTGATGCTGTCACTAATTTCCAGCACATCATGCAAGAGCAGGGCGACTTTCAGACG
GGTCTTCACTTGGTGCTGTGCTCGGTCGCTCTGGATGATGCCGAGGGTGGGAAGGCAGCT
TTCCACGCCATGTTGGACGTGGAGCCTCCGACGTATCATCACGACATTGCTATAGATGAT
GAGAACGATCCTTACGAGTGTGTGGTCCGGGACGTGGTGCGAGGTGATCGTCTGTCGAGA
TGGTCCCGCGCAGCCTCCGCCCTCGCCGAGCGCTGTCTGGCGCTGGCCGCCGCCGCCCTC
GCACGGGACGAAGACGCTGGGGGCACGTCATGGTGTGTAGAAGCACTTCGAGGCTATTCT
GGCGGCAGTGCGGGCGCGCGGCTGGAGTTAGGCAGCGCCCTGGCTGCGCTGCGCAGCGCC
GCCGGGACCGCTAGCACCGGGGCCGGCTCCGGGTCCACGGGCGCCATGGCCGCTGGAACC
AGAGCGCTGCAGCGGCTGAAGGCGGTGGCAAGAGCACATCCCAACGATCGTGTGTTGCGA
GCCGAAGCGAACGCCGATGCTGCCTTCGTAGCATACGCGTTGGGCAAGTATTCTGAGGCG
AGAACTCTGAGCGAGGCGGCATCCCGGGATGATCCGTATGGTTGCGCCGCTCGGGTAACT
CACGCTCTGTCCGCGATGGCGCCTCCCAGCCCGGCTCCGGGCGGTGTCCGACCTCCCTCC
ACGGCCTCTGACCCTGTGGTGCTGGCGGAGGCCACTGCGAGCCTCTCAGCCGCTACACAT
CTCGATCCTACCGATCTCATTGCTCTGCATGACTCAGCGCTAGCTTTGGAAATGGCGGGA
GAAGAGAAGAGCGCTGAGGCTCGTTGGCAGCGTATCCGCAGCGCGGCGACGGCGGGCGGC
ACGCTGAGGGGACTCGCCGCGGCCGGACTGGCGCGACTGGCGAGGAACAGGGGTGACGCC
TCGGCCGCAGAGCATTGGTACGGCGTGATAGGCAGTTGGGACGCTAGCGTCACTCTCGCG
CTGGCGGAGCTGCACGCGGAGGCGGGAGATCCGCAGACCGCCCAGCATCATTACCAAGAT
GTGGAGGCGGCGTGGCCGGGGGAGGAGGCGGCGCTCCGCTGGCTGGCCCGCGGACCTCCC
TCCTCGTCTCTGCCGTACTTGAGACGCGCCGCGCGGCTCCAGCCCGGACACCCCGAGTGG
GGTCTTCTGATGGGCGAGTGCCTCCGCGCCAATGGACAGTACCAGGAGGCGCTCACTGTT
TATAAAAAGCTCAACGCCAGATTCCCCGATAACGTCGAATGTCTAAAGCTGCTAGTGAAG
CTGTGCGGTGCGCAAGGCCTGGAGGAGGCGGCCGTGTGGCGGAGACAGCTGCGAGGGGTT
CTGGCGCGGGCTCAGGGAGAAACGAGGGGTGAGGGCTGTCGTTTGACGAAAACGGTTTTT
AAAGCGACGGCACGAAACGGCGACTCGCAGCGTGAAGCTCGCGCCCTGCTCGAGCGCGAC
CCGTGTCGTGAGCGCTGTGGCCCGCGCGTCGGTGTGCGTCGGTTGCCAGGTCGTTATCGG
GGCGGCTCGCTCGCGCCCAACTTGTCGATGTTTTTCGTTAAACTGAGCAACCGAGCGCCG
CCGACTTTGAGCCTCGATACGATTGTTTACGTTCTGATGACGTCAATATTAAATGTTCCT
AAAAGTGTGTTTTCGTCGAAGCGGCCGGGCGAGGGCGCGCGAGGACACGCGCACGGCTCA
GAGCAACATATACAATCACTGCGCTTGTCGGCGGCGAGCGCGTCTTCGGCCGAGGACCGC
GGCAGAGCAGCCACCGGTAAACCATTGAATGTTATAAATGAAATAAGTTACAAAACCCCT
CCGATACTATTCCCGTAG
Protein sequence:
MLGSRHGVSRQGGFKPPRTAVVIDDEDELYKGFNEVSPALDTKTLREDQVFQQTMRTANV
GRQAASRMGTGMFRVGTVSVRGARTGSARPVTALRAAGYSSGKDAPRDERKEDTIEDKVK
QMEAKIMTLVEESCVLVARRDTDDENDSTREQNLSQALAKAQEASTLERQLIRMQEQANL
GDSHNLDLTFAVLCNLADQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNMGNIHFKMG
EHPKALKLYRMALDQTPTAEKDLRMKVMHNIGLLLVRMGKFRDAVTNFQHIMQEQGDFQT
GLHLVLCSVALDDAEGGKAAFHAMLDVEPPTYHHDIAIDDENDPYECVVRDVVRGDRLSR
WSRAASALAERCLALAAAALARDEDAGGTSWCVEALRGYSGGSAGARLELGSALAALRSA
AGTASTGAGSGSTGAMAAGTRALQRLKAVARAHPNDRVLRAEANADAAFVAYALGKYSEA
RTLSEAASRDDPYGCAARVTHALSAMAPPSPAPGGVRPPSTASDPVVLAEATASLSAATH
LDPTDLIALHDSALALEMAGEEKSAEARWQRIRSAATAGGTLRGLAAAGLARLARNRGDA
SAAEHWYGVIGSWDASVTLALAELHAEAGDPQTAQHHYQDVEAAWPGEEAALRWLARGPP
SSSLPYLRRAARLQPGHPEWGLLMGECLRANGQYQEALTVYKKLNARFPDNVECLKLLVK
LCGAQGLEEAAVWRRQLRGVLARAQGETRGEGCRLTKTVFKATARNGDSQREARALLERD
PCRERCGPRVGVRRLPGRYRGGSLAPNLSMFFVKLSNRAPPTLSLDTIVYVLMTSILNVP
KSVFSSKRPGEGARGHAHGSEQHIQSLRLSAASASSAEDRGRAATGKPLNVINEISYKTP
PILFP