| New model in OGS2.0 | DPOGS204455 |
|---|---|
| Genomic Position | scaffold459:+ 77395-85805 |
| See gene structure | |
| CDS Length | 1032 |
| Paired RNAseq reads | 1334 |
| Single RNAseq reads | 3179 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013473 (1e-16) |
| Best Drosophila hit | glorund, isoform A (5e-30) |
| Best Human hit | G-rich sequence factor 1 isoform 1 (2e-49) |
| Best NR hit (blastp) | PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) [Tribolium castaneum] (2e-83) |
| Best NR hit (blastx) | PREDICTED: similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) [Tribolium castaneum] (8e-78) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0000166 nucleotide binding |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL10507 |
Nucleotide sequence:
ATGTTGGGATCCGGTGATGGTAGCTATATTATAAAACTACGGGGCTTGCCTTTCTCCACT
ACTGCTGAAGATGTCCTCACATTTCTAAGCGGCGTAAATGTTATAAACGATAAAGAAGGT
GTCCATTTGACCGAGGTTAGACCTGGTAGGCCTTCTGGAGAATGTTTCGTAGAGGTGCAG
AGTCAAGACGATGTCACTCACGCGTTGAAAAAAGACAAAGAAAATATTGGCAGACGGTAC
ATTGAAGTCTTTTCCACCGATCGTCAGGACATGGAGTGGGCGTTAAATGCTATGAGACAG
AGTGAAAATGGTTTTGATGTTATACCCAATGTGTCTGATGATTTTGGAATAGTAAAATTG
AGGGGCTTGCCTTTTGGTTGCTCTAAAGAGGAAATTATACAATTCTTCAACGGGTTGTCG
GTGGTCCAGGACGGGGTGCACTTGCTCTCGGATCACACGGGGCGGGCCTCCGGCGAGGCG
TTTGTATACTTCGTAGACAAGCAGAGCGCTCGAGACGCTCTTGACAGGGACATGGAGAAA
ATAGGACACAGATACATAGAGGTGTTCCTAAGTTCAGCGGACAAGGTGCGAGCGTACGGC
GCTCGGCTGGAGGGTGGCGGGTTCAAGTCCCGGGGATACAGACCCACGCCCTACGACAGG
AACGACAGGCTCTCCGGCCGGTTCGGGGGCAGGGGGAGGGGGTCCTTCGCCAGAGGAGGT
TCGGGAGGCTCGTACACGGGCCGCGGCGGCCGGCTGGGCTCCAGCCACTGTGTACACATG
AGGGGGCTGCCGTTCAAGGCGACGCCGCAGGACATCGCATATTTCTTCAAGCCGATCCGT
CCTCTGAATATCAACATACACTACGACAACAGCGGCCGACCCTCGGGGGAGGCGGACGTG
GAGTTCGAGTGTCACGAGGACGCCATGAGGGCGATGCGCCGTGACAAGAACAACATGGAA
CACCGCTACATCGAGTTGTTCATGAACTCCTCGCCGACCTTCAAGAGCCCGCGCCCGTTC
CGCACCTACTGA
Protein sequence:
MLGSGDGSYIIKLRGLPFSTTAEDVLTFLSGVNVINDKEGVHLTEVRPGRPSGECFVEVQ
SQDDVTHALKKDKENIGRRYIEVFSTDRQDMEWALNAMRQSENGFDVIPNVSDDFGIVKL
RGLPFGCSKEEIIQFFNGLSVVQDGVHLLSDHTGRASGEAFVYFVDKQSARDALDRDMEK
IGHRYIEVFLSSADKVRAYGARLEGGGFKSRGYRPTPYDRNDRLSGRFGGRGRGSFARGG
SGGSYTGRGGRLGSSHCVHMRGLPFKATPQDIAYFFKPIRPLNINIHYDNSGRPSGEADV
EFECHEDAMRAMRRDKNNMEHRYIELFMNSSPTFKSPRPFRTY