| New model in OGS2.0 | DPOGS214829 |
|---|---|
| Genomic Position | scaffold2531:+ 15364-19647 |
| See gene structure | |
| CDS Length | 963 |
| Paired RNAseq reads | 428 |
| Single RNAseq reads | 1767 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013933 (5e-71) |
| Best Drosophila hit | CG14688 (5e-07) |
| Best Human hit | phytanoyl-CoA dioxygenase, peroxisomal isoform a precursor (3e-48) |
| Best NR hit (blastp) | phytanoyl-CoA dioxygenase peroxisomal precursor [Bombyx mori] (1e-97) |
| Best NR hit (blastx) | phytanoyl-CoA dioxygenase peroxisomal precursor [Bombyx mori] (2e-93) |
| GeneOntology terms | GO:0031418 L-ascorbic acid binding GO:0048244 phytanoyl-CoA dioxygenase activity GO:0003824 catalytic activity GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GO:0005515 protein binding GO:0046872 metal ion binding GO:0001561 fatty acid alpha-oxidation GO:0055114 oxidation reduction GO:0016491 oxidoreductase activity GO:0005739 mitochondrion GO:0005777 peroxisome |
| InterPro families | IPR000215 Protease inhibitor I4, serpin IPR008775 Phytanoyl-CoA dioxygenase |
| Orthology group | MCL17247 |
Nucleotide sequence:
ATGCCTTACCAGTTCATAGCCAACAAACCATTCCTATACATGATCGTTGATAAACAGGTT
GAAGTACCCCTCTTCATGGGCGCCTACTCGAAGCCTTCCTTAATGCTAAGCGATAAATCA
AATACTTACAAACTGTCTGAGGAGCAAAAACAATTCTATGAAGACAATGGATACTTGGTT
ATTAAGGAACTATTTGATTTTGGAACACTTTATAACTTGAAGAAAAGGTTCCAACAAATA
TGTAGAGGAATCGTTGACAAAGGGAACATGCCTGTGTTTAAGGAACCAAAACTTTTAGCT
AAAGGTTTGAAGGGAGAGGATCTCGTTAACAAAGTATCAGACATTCATTTTGACGAGGTT
TTCTCAACATATACTGAACATCCTCGTCTAATCAATGTACTGTCACAAATCATAGGACGC
GATATGAGCGTCATGAACGGCATGTTCATCAACAAACCTCCGGGAAGTACGAGACATCCG
CCACATCAGGACCTGTATTACTTTCCGTTCCGGCCAGCGGACAAGATCATAGCAGCCTGG
ACGGCCATCGACGATGTCACAGTAGACAACGGATGTCTTTATGTTGTACCGAGATCCCAT
AAGAACAATGTTATATACAGACACGGGAACTTACCAGACTCCAACAAGCTGTACCACGGC
ATCTTGGAGGCCGCTCCCTGTGAGCCGAGGGTCTGCCTGGAGATGTCTCCCGGAGACACC
GTCTTCTTCCATCCTCTCATCGTTCACGGCTCCGGGGAAAATATAACACAGGGGTATCGC
AAGTCGATAACGGCTCACTACGCGAGCACCTCGTGTCACTGTGTGGACGTGAGGGGGACG
GTACAGGACGAGCTGGCTCAGGAGCTGGAGCAGGAGGCCAAGAGGAGGGGGATGGAGATC
AGCTTCCAGGATCTGTGGCAGTACAAGAGTAAAGTAGTGTCCGGGCCATCCTCCAAACTG
TGA
Protein sequence:
MPYQFIANKPFLYMIVDKQVEVPLFMGAYSKPSLMLSDKSNTYKLSEEQKQFYEDNGYLV
IKELFDFGTLYNLKKRFQQICRGIVDKGNMPVFKEPKLLAKGLKGEDLVNKVSDIHFDEV
FSTYTEHPRLINVLSQIIGRDMSVMNGMFINKPPGSTRHPPHQDLYYFPFRPADKIIAAW
TAIDDVTVDNGCLYVVPRSHKNNVIYRHGNLPDSNKLYHGILEAAPCEPRVCLEMSPGDT
VFFHPLIVHGSGENITQGYRKSITAHYASTSCHCVDVRGTVQDELAQELEQEAKRRGMEI
SFQDLWQYKSKVVSGPSSKL