| New model in OGS2.0 | DPOGS205522 |
|---|---|
| Genomic Position | scaffold2228:- 24245-26955 |
| See gene structure | |
| CDS Length | 936 |
| Paired RNAseq reads | 9674 |
| Single RNAseq reads | 23399 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000074 (1e-124) |
| Best Drosophila hit | fibrillarin (9e-118) |
| Best Human hit | rRNA 2'-O-methyltransferase fibrillarin (5e-107) |
| Best NR hit (blastp) | Fib [Drosophila erecta] (2e-124) |
| Best NR hit (blastx) | Fib [Drosophila erecta] (9e-121) |
| GeneOntology terms | GO:0001651 dense fibrillar component GO:0003723 RNA binding GO:0006396 RNA processing |
| InterPro families | IPR000692 Fibrillarin IPR020813 Fibrillarin, conserved site |
| Orthology group | MCL12794 |
Nucleotide sequence:
ATGGGAAAACCAGATTTTAAGAGTCCACGTGGAGGTGGTAGAGGTGGTGGCCCACGCGGC
GGACGAGGCGGCGGAGGCCGAGGGGGCTTCGGAGGAAGAGGAGGCGGTGGAGGAGGGAAG
TTTGAAAAGAGGGGTGGGGGAGGAGGGAGAGGCTTCGGAGGCAGGGGTGGAGGTCGCGGT
CGGGGCGGAGGCCGAGGCGGCGGGGGCGGAGGTTTCAAGGGCGGGAAACAAGTCATTATT
GAACCTCACAGACATCCCGGTGTATTCATAGCAAGAGGTAAAGAAGACGCCCTCGTCACT
AAGAACCTTGTGCCGGGCTCTGAGGTGTATGGGGAGAAGAGGATTTCTGTTGAAAACGAA
GGAGAGAAAATTGAATACAGAGTATGGAACCCCTTCCGTTCCAAGTTGGCTGCGGCTATC
ATGGGCGGAGTTGATGCTATTCACATGCCTCCAGGGTCGAGGGTGTTGTATCTCGGAGCT
GCCAGTGGAACCACAGTCAGTCATGTATCGGATGTTGTAGGGCCCGAAGGTCTAGTGTAT
GCCGTAGAGTTCTCACACAGATCGGGAAGAGATTTAATAAATGTGGCTAAGAAGAGGACT
AATATTATACCCATCATAGAAGATGCCAGACATCCGCTGAAATACAGAATGCTAGTTGGC
ATGGTCGACACAATATTCGCGGACGTCGCTCAACCCGACCAAGCCAGGATAGTTAGTTTA
AACGCACAACACTTCCTCAAGAACGGAGGACATTTTGTCATATCTATAAAGGCTTCATGT
ATCGACTCCACGGCACAACCCGAGGCAGTGTTCGCAGCGGAGGTTAAGAAACTGCAAGCG
GACAAACTGAAGCCCCAAGAACAGCTGACGCTGGAGCCCTACGAGAGGGACCACGCGGTT
GTCGTGGGAGTGTTCAGGCCGCCGAAGAAGCCCTAG
Protein sequence:
MGKPDFKSPRGGGRGGGPRGGRGGGGRGGFGGRGGGGGGKFEKRGGGGGRGFGGRGGGRG
RGGGRGGGGGGFKGGKQVIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENE
GEKIEYRVWNPFRSKLAAAIMGGVDAIHMPPGSRVLYLGAASGTTVSHVSDVVGPEGLVY
AVEFSHRSGRDLINVAKKRTNIIPIIEDARHPLKYRMLVGMVDTIFADVAQPDQARIVSL
NAQHFLKNGGHFVISIKASCIDSTAQPEAVFAAEVKKLQADKLKPQEQLTLEPYERDHAV
VVGVFRPPKKP