| New model in OGS2.0 | DPOGS206464 |
|---|---|
| Genomic Position | scaffold599:+ 13518-16781 |
| See gene structure | |
| CDS Length | 1413 |
| Paired RNAseq reads | 218 |
| Single RNAseq reads | 572 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005342 (3e-177) |
| Best Drosophila hit | CG8445, isoform B (2e-103) |
| Best Human hit | ubiquitin carboxyl-terminal hydrolase BAP1 (3e-89) |
| Best NR hit (blastp) | ubiquitin c-terminal hydrolase x4 [Aedes aegypti] (1e-128) |
| Best NR hit (blastx) | PREDICTED: similar to ubiquitin c-terminal hydrolase x4 [Nasonia vitripennis] (1e-125) |
| GeneOntology terms | GO:0000790 nuclear chromatin GO:0003682 chromatin binding GO:0004221 ubiquitin thiolesterase activity GO:0004843 ubiquitin-specific protease activity GO:0006342 chromatin silencing GO:0035517 PR-DUB complex GO:0035522 monoubiquitinated histone H2A deubiquitination |
| InterPro families | IPR001578 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 |
| Orthology group | MCL16229 |
Nucleotide sequence:
ATGCCCGTGGAATTAAATAGTCTTACAGAGGGATGGCTAGAATTAGAAAGTGATCCGGGT
CTATTCACTTTACTCCTTGAAGATTTCGGCGTAAAGGGAGTCCAAGTGGAGGAAATATAT
GATTTACACAAACCTCTAGAAAGCCCGGTTTATGGGTTTATTTTTTTATTTCGCTGGATT
GAAGAAAGACGATCACGTCGTAAATTTGTCGAACAGATTGAAAGCTTCGTGCGTGATGAA
GAAACAATAAATAATATATTTTTCGCCCAACAAATGGTTCCGAACAGTTGTGCTACACAT
GCACTACTGTCCATATTACTTAATTGTCCAAATCTCCATTTAGGAGAAACACTGAGCCGA
TTAAAGCATCATACACTAGGTATGAATCCTGAGAACAAAGGTTGGGCCATAGGAAACACG
CCTGAATTAGCTTGTGCACACAATTCCCATGCTATACCACAAGCTCGCAAAAAGACTGAT
AAAAATGCTGGAGTTCCTACTGGTCGCTTTACAGGTGAAGCGTACCATTTTGTAAGTTTT
GTGCCCATAAATGGTCATTTATTTGAATTGGATGGCTTAAAGCCCTTTCCAACTGACCAT
GGTCCATGGGCCTCTGACGAAGATTGGACTGACAAGTTTCGAAGAGTCATGGCTGAGAGA
CTAGGAAGAGATGCCGGAGAACAAGTACATGATATAAGATTTAATCTCATGGCGGTAGTA
CCAGATAGACGAATAGCATTGACTCAAAGATTAAGTGCTTTGGAATTAAACCAAAGGAGA
CTCAAAGAGGCCATCTCTAAAATAGGCAAACATCTAAGACATTTATTGAACAAGAATAGA
GATTTTAACGAAGATTCACTGTCCAGCATGAACAATGTTGATGGATCAAATGAAAGTTCC
ATTCAAATATGCGAGGACGCAATTCTCAATGCCTTAGAGGCTTCAGAGGTGTCATCCTTG
AATATAAATATAACAGATGCCATTACAATCGAAATTGGTGCCTCGGACAGTGCGTATGAT
AGCACTATAACCTTAGCTGATCCTATTGATCAAACTGCTGTTGTCAAATTTGTGACAATT
AATGGTGAAAACGAGATATTGTCAGATATATACCCCACATCTACGACCGCACTCATCAAG
AGTAACAACATGCCAGTTGTATTGTGTTGTGAAGTGGTCCCGGAACAGCCTTACAGGATG
AGGAAGCTTCTGTTCACTCACGCCGAGCTGAACTCACTCATGAACAGCATCATGAGTGAG
GTCCAGGCGTGCCAACAGGCGCTCAATGATGAGAATGATAAAAGAGATATGTACAAGCTC
AAACATGGGCTGGCTCGACCGGGGAATTACCGCCCTCTCAAGGAAAATCGGCGTGAAGTA
GTCATTGATGACTGCATTTCGTCCGATGAGTGA
Protein sequence:
MPVELNSLTEGWLELESDPGLFTLLLEDFGVKGVQVEEIYDLHKPLESPVYGFIFLFRWI
EERRSRRKFVEQIESFVRDEETINNIFFAQQMVPNSCATHALLSILLNCPNLHLGETLSR
LKHHTLGMNPENKGWAIGNTPELACAHNSHAIPQARKKTDKNAGVPTGRFTGEAYHFVSF
VPINGHLFELDGLKPFPTDHGPWASDEDWTDKFRRVMAERLGRDAGEQVHDIRFNLMAVV
PDRRIALTQRLSALELNQRRLKEAISKIGKHLRHLLNKNRDFNEDSLSSMNNVDGSNESS
IQICEDAILNALEASEVSSLNINITDAITIEIGASDSAYDSTITLADPIDQTAVVKFVTI
NGENEILSDIYPTSTTALIKSNNMPVVLCCEVVPEQPYRMRKLLFTHAELNSLMNSIMSE
VQACQQALNDENDKRDMYKLKHGLARPGNYRPLKENRREVVIDDCISSDE