| New model in OGS2.0 | DPOGS214068 |
|---|---|
| Genomic Position | scaffold786:+ 2492-4666 |
| See gene structure | |
| CDS Length | 615 |
| Paired RNAseq reads | 163 |
| Single RNAseq reads | 750 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010566 (1e-64) |
| Best Drosophila hit | prolyl-4-hydroxylase-alpha EFB (2e-32) |
| Best Human hit | prolyl 4-hydroxylase subunit alpha-2 isoform 1 precursor (3e-26) |
| Best NR hit (blastp) | prolyl 4-hydroxylase alpha subunit [Bombyx mori] (1e-65) |
| Best NR hit (blastx) | prolyl 4-hydroxylase alpha subunit [Bombyx mori] (4e-66) |
| GeneOntology terms | GO:0016222 procollagen-proline 4-dioxygenase complex GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline GO:0004656 procollagen-proline 4-dioxygenase activity GO:0031418 L-ascorbic acid binding GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GO:0005783 endoplasmic reticulum GO:0055114 oxidation reduction GO:0005506 iron ion binding |
| InterPro families | IPR013547 Prolyl 4-hydroxylase alpha-subunit, N-terminal IPR011990 Tetratricopeptide-like helical |
| Orthology group | ND |
Nucleotide sequence:
GAATATATTAAAAACATAACAATTATAAATAATCACGCGAATGTCAAATATCCAACTTTG
GAGGATTTAACTGGAGCTGCGCAGGCGCTGACAAGATTGCAACAGACATACAAACTAGAT
GTCAAGGACCTGTCAGAGGGGAGGCTCAATGGAGTTGTTTACAGCACACCAATGAGCGCT
GGAGACTGCTACGAGCTCGGCAAAGCTCTGTACAATGAAAAGGATTATGACAATGCGTTG
GATTGGATGATGGAGGCGTTGTACAAGTTTGTGGACGAAGACCAACCCTACCCGTTCAGC
GAGGCCGATATATTGGAATACATAAGCTTCTCCCATTATCTTTTAGGCGATCTTAAAAGC
GCGATAGAATGGACTAAGAATCTTTTGCTGGTTGAACCAAAACACAGCAGAGCTGCCGGC
AATCTGCCTCATTACCAGAAAGCGTTACAGGACAAAGAGTTGCAGGCGAAGAAAAGGCGC
AAAGGGGACACTGGCGAACCGGATATCGAATACGAGGCGCAGGTTAAAGAGTCAAGGTCA
ACGTCCTACAACGCGGAGAGACAATCATATGAAGCGTTATGCCGCGGGGAGAAGGAATTA
CCACGCCTTTATTGA
Protein sequence:
EYIKNITIINNHANVKYPTLEDLTGAAQALTRLQQTYKLDVKDLSEGRLNGVVYSTPMSA
GDCYELGKALYNEKDYDNALDWMMEALYKFVDEDQPYPFSEADILEYISFSHYLLGDLKS
AIEWTKNLLLVEPKHSRAAGNLPHYQKALQDKELQAKKRRKGDTGEPDIEYEAQVKESRS
TSYNAERQSYEALCRGEKELPRLY