| New model in OGS2.0 | DPOGS214069 |
|---|---|
| Genomic Position | scaffold786:+ 5215-7215 |
| See gene structure | |
| CDS Length | 708 |
| Paired RNAseq reads | 314 |
| Single RNAseq reads | 1198 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010566 (3e-97) |
| Best Drosophila hit | prolyl-4-hydroxylase-alpha EFB (1e-75) |
| Best Human hit | prolyl 4-hydroxylase subunit alpha-1 isoform 1 precursor (2e-66) |
| Best NR hit (blastp) | prolyl 4-hydroxylase alpha subunit [Bombyx mori] (1e-105) |
| Best NR hit (blastx) | prolyl 4-hydroxylase alpha subunit [Bombyx mori] (1e-97) |
| GeneOntology terms | GO:0016222 procollagen-proline 4-dioxygenase complex GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline GO:0004656 procollagen-proline 4-dioxygenase activity GO:0031418 L-ascorbic acid binding GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GO:0005783 endoplasmic reticulum GO:0055114 oxidation reduction GO:0005506 iron ion binding |
| InterPro families | IPR006620 Prolyl 4-hydroxylase, alpha subunit IPR005123 Oxoglutarate/iron-dependent oxygenase |
| Orthology group | MCL11154 |
Nucleotide sequence:
ATGACAGAAAACCACCCGTTCCTGAGACTAGCGCCGGTCAGAATGGAGTACTTGTACAGG
AATCCAGACATTATTGTATTTAACGACGTCCTCAGCGACTATGAAATTGATTATATAAAA
AGAATCGCTCAACCGAGGTTCCGTCGCGCGACCGTCCACGACCCAGCGACCGGCGAGTTG
GTCCCCGCTCACTATAGGATCAGCAAGTCAGCGTGGCTCAAGGACGAGGAGTCAGCGGTG
GTCGCGCGTGTGTCACGGCGTGTCGCCGATATAACCGGCCTTAGTATGACCACCGCTGAG
GAGTTACAGGTCGTTAACTACGGCATCGGAGGCCATTATGATCCACACTTTGACTTCGCA
AGGAAAGAAGAAAACGCATTTGAGAAGTTCAATGGCAACCGCATAGCTACAGTCCTGTTT
TACATGTCAGACGTGGCTCAAGGCGGGGCGACAGTGTTCACTGAGCTCGGCCTAAGCGTG
TTCCCGCGGCGAGGGTCGGCTGTGTTCTGGCTGAATCTGCATCCGTCCGGTGAAGGAGAC
CTCGCCACCCGACACGCCGCCTGCCCCGTACTGAGGGGCTCCAAGTGGGTTTGTAACAAG
TGGATACATCAAGGCGGCCAAGAATTAATAAGACCTTGCAATCTGGAATACCAAAAAGAA
AGCATCATACGGCCGATACCGCAACCAATCGAAAAGTTCTTCAGATAA
Protein sequence:
MTENHPFLRLAPVRMEYLYRNPDIIVFNDVLSDYEIDYIKRIAQPRFRRATVHDPATGEL
VPAHYRISKSAWLKDEESAVVARVSRRVADITGLSMTTAEELQVVNYGIGGHYDPHFDFA
RKEENAFEKFNGNRIATVLFYMSDVAQGGATVFTELGLSVFPRRGSAVFWLNLHPSGEGD
LATRHAACPVLRGSKWVCNKWIHQGGQELIRPCNLEYQKESIIRPIPQPIEKFFR