| New model in OGS2.0 | DPOGS201605 |
|---|---|
| Genomic Position | scaffold1498:+ 19448-59638 |
| See gene structure | |
| CDS Length | 3183 |
| Paired RNAseq reads | 2421 |
| Single RNAseq reads | 6920 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012168 (7e-29) |
| Best Drosophila hit | murashka, isoform C (5e-43) |
| Best Human hit | RING finger protein 38 isoform 1 (4e-29) |
| Best NR hit (blastp) | eIF2B-beta protein [Bombyx mori] (5e-56) |
| Best NR hit (blastx) | ring finger protein [Culex quinquefasciatus] (1e-52) |
| GeneOntology terms | GO:0005575 cellular_component GO:0008355 olfactory learning GO:0007611 learning or memory GO:0008270 zinc ion binding GO:0005515 protein binding |
| InterPro families | IPR000649 Initiation factor 2B-related IPR018957 Zinc finger, C3HC4 RING-type IPR013083 Zinc finger, RING/FYVE/PHD-type IPR001841 Zinc finger, RING-type |
| Orthology group | MCL29417 |
Nucleotide sequence:
ATGGGCCCACCTGAAGGTATGAAAGAATTGGACGAAAAAAGTATGGAAAGTTTAGTGAAT
TTCGTAGCAGATGTACGGACAGGCAAGGTCCAAGGTTCAGAGAACATAGCGCTGGCGACT
GTCAATCTATTGGAGCAGATAATAACCGACCTGGAAACGTCTACGGCCATGTCTTTAATA
AATGCTGTCCGTGTCGCTGGACGGCAGCTGGCTAGGGCGCTGCCATCAGAACACTTCGCT
GCTAACATGGTGAGGCGAGTGCTGCGTGCTGTTAGGGACGAGCAGCGTGCGCAACATAAC
CAGAGTGTGGAAGGTGCTGGCGAGTCTCTAGCTAGGCTGGTGCTGGCGGCGCCCCTCAGA
CGTGGGACGTTGCCCAGTGGGAGAGACTTGAGGGAACCGCTGAGAGATCATATAGCTGAG
CTGCGAGCCGAGCTGGATTCCAGCACTTCATCGATCTGCTCCCAGGCCAAGGAACACCTG
CACGCTGAAGACCTAGTACTGTCGTATGGAGGTGGCGCTTTACTGGAAAAGTTCCTCAAG
AGCAGCACAAGGAAATACAAACTCCTACTAGCAGCTGGTCCAGATGTTACAGAGTGTCAC
TCGATGGCTGTCCGTCTGTCACACAGCGGTGTCTCCGTAACAGTGACCAGCGCGGCCGCT
GTGGGCGCCCTGATGTCCAGGGTCAACAAGCTGCGAGCCGAGCTGGATTCCAGCACTTCA
TCGATCTGCTCCCAGGCCAAGGAACACCTGCACGCTGAAGACCTGGTACTGTCGTATGGA
GGTGGCGCTTTACTGGAAAAGTTCCTCAAGAGCAGCACGAGGAAATACAAACTCCTACTA
GCAGCTGGTCCAGATGTTACAGAGTGTCACTCGATGGCTGTCCGTCTATCACACAGCGGC
GTCTCCGTAACAGTGACCAGCGCGGCCGCTGTGGGCGCCCTGATGTCCAGGGTCAACAAG
GTGGTGTTGGAGGCCGTGGGAGCGCTGTCCGGGGGCTCCGCCCTGGCCGCGGCGGGGACC
CTCGCCCTCACCACCGCCGCCGCCCACCGAGCTGTGCCGGTGGTGGTGCTGTGTCCGCTC
CACGCTCTGTGTGCTGTCCACGCCTGCGAGAGACGTCTGCTAGCATCAGATTCTCCACCG
GCTGAAGCTATACCATATCAGAACTTGGAATCTTCTGTGTCACGAGTGGTGTCTCCCAAG
TATGACGTCCTGCCTCCGGACCACATTTCACTGTTCATAACAAATCTCGGAGGCAGCTCA
CCTTCGTACATCTACCGACTTCTCTCTGAGATATACGATCCGAGTGATAAAGAACAGCGG
GCGTCCGAGCCCGCTTCGGCGCCGATCGATACGTTGTGGTATGGCGCAGGAGATATGAGC
CAGGGGGGCTCGAGACGGCCCTATTCGCGCGGGGGCCCGCGCTGGCACCCGCGCTACAAG
GACTACTGGGACTACGAGCAGAACTACAGCGATGGCAGCAGTGCAGGTAGCCCCAAGGAG
GCGTGTGTGGCTCAGTCCCCGCCACCGGTGCCAGCCAAGAGACACCCTCACCATCACCAC
GAACAGCGCCGTCTCAGTGTCGGCGGCGGAGCGGGCGGCTCGCGTCGCGCCGAGCGTCGC
GCCGCCGGCCCTTCAAACCGCCGAACAGAACTGCGAGTGAGCCCGGGGGCGGGGGCCGGG
ACCTCCGCTGAGTCTCCACACCTACATCACACTGCACACCATCATCACATGGACACCAAT
CCTCTTGAGGGTTCAGCGCCCCTGGAAGCCGTTGTCGGCGCCAGCGCTGGATCTTCAGAC
GAACTGTCCAGCAAACCTGGTGACAGTCCCACAAGGAAAAGACGTCGCATATCAAGGCAT
CTGTCGACAGGTGAGAGTAACGTGACGGTAGCTGCGCCGCCGGTCGAGAGGCGGACACCG
CGCCACCACTACCAGCCACCTCGCCGCGTGCGTTACGTCAGCGGGAACGGTGCGGGGGTG
TGGCATGAGCGGCTGTTGGACCAGCACGCTGCTCACCCGTCACACCCTCACCCCGCTCAC
CCCGCGCACCCCGCCCATCCTGCTCACCCCGCTCACCCTGCGCACCTATCACACGCGCAC
CACACGCCGCTGCTGTTGGACATCAACCAGATGTCGCTGCGCGGCGCTCGCCTCAGTGCG
CTGGGTGGTGGCGTGGGTTGGGGGCACCACGCCCCCCACCACGCTCCACATCACGCCCCA
CATCAACACCAACACCATCGAGAGCATCCAACTAGGACCCAGATGGGCGGCGTGTACGCG
GGACTGCAGTACCACGGGAGCTTCGCGCCGGCGCCGCCCCCACGAGGACCCTTCGCCTCC
CCCCCTCATCCACACACGCACTACATCACCAACTCACAGCGTTCGGAAGGAGGTCGTCTG
GAAATGTTGGGTAGCGGTGAAGGTGGACTGTCTCCGCTGCAGCCGACAGCTGATCTCCAC
CACGCGCCCCTGTTACTCGCCACCGAGGCGCGGGGTGCTCCGTTGGAACTGATGGCACCT
CATCACGCGAGACACGCGCTATCACATCACCACCATCGCCGTAGTGGTGGCGGCGTGGGC
GTCGGCGGTGGCGTGGGCGTGGGCGTCGGTGTCGGTGTGGGCGTGGTGGGCGCCGGTTCG
CGAGCAGCCCGGCCGTACGTCCGTGCAGCTCCGCGCTGGGCCGCCCATCCTCACACCGTG
CATCACATACACCAGGGTGGTGGAGGTCTGGTCCAAGCGACGCTCCCCGCTCAGCTGCAC
GTAGCGTCGCCACTGTCACTGCCACCGCCGCCCCCCACTTACCAGGTGTTCCTAAATCTG
TTGGCAATGTTCCCGCTGTCACCGTACGCGGAGGCCCGGGACGAGGCCGGGGACTCCCCG
GAGACGGAGAACTACGAGGCGCTGCTGTCGCTGGCGGAGCGCCTGGGAGAGGCGAAGCCC
CGGGGGCTCGCCAGACACGAGATAGACCTACTGCCTTCATACAAATACTCTGAACAAACT
CACCAGGGTGAGCAGACCTCGTGCGTGGTGTGCATGTGTGAGTTCGAGGCCCGGCAGACG
CTCCGCGTGCTGCCTTGCGCCCATGAGTTCCACGCTAAGTGTGTTGATAAGTGGCTTCGG
TCAAATCGAACGTGTCCCATATGCCGCGGGAACGCGTCGGAGTACTTCACCAACTCGGAG
TGA
Protein sequence:
MGPPEGMKELDEKSMESLVNFVADVRTGKVQGSENIALATVNLLEQIITDLETSTAMSLI
NAVRVAGRQLARALPSEHFAANMVRRVLRAVRDEQRAQHNQSVEGAGESLARLVLAAPLR
RGTLPSGRDLREPLRDHIAELRAELDSSTSSICSQAKEHLHAEDLVLSYGGGALLEKFLK
SSTRKYKLLLAAGPDVTECHSMAVRLSHSGVSVTVTSAAAVGALMSRVNKLRAELDSSTS
SICSQAKEHLHAEDLVLSYGGGALLEKFLKSSTRKYKLLLAAGPDVTECHSMAVRLSHSG
VSVTVTSAAAVGALMSRVNKVVLEAVGALSGGSALAAAGTLALTTAAAHRAVPVVVLCPL
HALCAVHACERRLLASDSPPAEAIPYQNLESSVSRVVSPKYDVLPPDHISLFITNLGGSS
PSYIYRLLSEIYDPSDKEQRASEPASAPIDTLWYGAGDMSQGGSRRPYSRGGPRWHPRYK
DYWDYEQNYSDGSSAGSPKEACVAQSPPPVPAKRHPHHHHEQRRLSVGGGAGGSRRAERR
AAGPSNRRTELRVSPGAGAGTSAESPHLHHTAHHHHMDTNPLEGSAPLEAVVGASAGSSD
ELSSKPGDSPTRKRRRISRHLSTGESNVTVAAPPVERRTPRHHYQPPRRVRYVSGNGAGV
WHERLLDQHAAHPSHPHPAHPAHPAHPAHPAHPAHLSHAHHTPLLLDINQMSLRGARLSA
LGGGVGWGHHAPHHAPHHAPHQHQHHREHPTRTQMGGVYAGLQYHGSFAPAPPPRGPFAS
PPHPHTHYITNSQRSEGGRLEMLGSGEGGLSPLQPTADLHHAPLLLATEARGAPLELMAP
HHARHALSHHHHRRSGGGVGVGGGVGVGVGVGVGVVGAGSRAARPYVRAAPRWAAHPHTV
HHIHQGGGGLVQATLPAQLHVASPLSLPPPPPTYQVFLNLLAMFPLSPYAEARDEAGDSP
ETENYEALLSLAERLGEAKPRGLARHEIDLLPSYKYSEQTHQGEQTSCVVCMCEFEARQT
LRVLPCAHEFHAKCVDKWLRSNRTCPICRGNASEYFTNSE