| New model in OGS2.0 | DPOGS203816 |
|---|---|
| Genomic Position | scaffold120:+ 287501-289363 |
| See gene structure | |
| CDS Length | 795 |
| Paired RNAseq reads | 1183 |
| Single RNAseq reads | 4451 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003475 (5e-80) |
| Best Drosophila hit | eEF1delta, isoform B (6e-47) |
| Best Human hit | elongation factor 1-delta isoform 2 (2e-43) |
| Best NR hit (blastp) | elongation factor 1 delta [Bombyx mori] (6e-99) |
| Best NR hit (blastx) | elongation factor 1 delta [Bombyx mori] (2e-87) |
| GeneOntology terms | GO:0005853 eukaryotic translation elongation factor 1 complex GO:0003746 translation elongation factor activity GO:0006414 translational elongation GO:0005085 guanyl-nucleotide exchange factor activity GO:0005875 microtubule associated complex |
| InterPro families | IPR001326 Translation elongation factor EF1B, beta/delta chains, conserved site IPR014038 Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange IPR014717 Translation elongation factor EF1B/ribosomal protein S6 IPR018940 Elongation factor 1 beta central acidic region, eukaryote |
| Orthology group | MCL16417 |
Nucleotide sequence:
ATGTCTGCCTTAGTACACGAAAAAGTTTGGCTCGATAAAACCGCTTATAATGATGCCGAA
AGAAACTACTACGAATCACTATCAAAAGGAAAAATTCCCTCCATTGGTGTTGGGGCTACA
TCATCTTTGGCCAGTGAGGTAGCTAAAGCTAGACAGCATATCAAAAACTCACTGGAATGT
ATGGACAATGTTGCTTCATTAAGTGGAGTACCAAATACTGAAATTAACAACAAACTTAAC
TCTTTGGAGAAAGAGAACTCGGACCTCAAAAAAGCAGTTGATGATCTCCGCAAATTGGTT
ATTAGTCTACAAGCACGAGTCGAATCATTGGAAGCGTCTGAACCCAGTGTATCCAAATCT
GCAGCTCCTAAGGCCGCAGCGCCTGCCCCAGCCCCTGCTGAGGACTCAGATGATGGAGTA
GATTTGTTTGGGTCTGATGATGAAGAGGAAAGTGCTGAAGCTGCAAAACTAAGAGAGGAG
CGGCTAGCGGCATATAATGCAAAGAAATCCAAAAAACCAGTCCTCATTGCAAAGTCCAAC
ATTATACTTGATGTAAAGCCTTGGGACGATGAAACAGACATGAAAGCTATGGAAGATGCT
GTCAGAACAATCAGCATTGATGGTCTATTGTGGGGTGCTGCAAAACTAGTACCATTAGCT
TTTGGTATTCACAAGTTGCAAATATCCTGCGTTGTTGAAGATGACAAGGTGTCAATCGAT
TGGCTGACTGAAGAAATTGAAAAATTGGAGGACTTTGTTCAAAGTGTTGATATTGCTGCC
TTCAACAAAGTTTAA
Protein sequence:
MSALVHEKVWLDKTAYNDAERNYYESLSKGKIPSIGVGATSSLASEVAKARQHIKNSLEC
MDNVASLSGVPNTEINNKLNSLEKENSDLKKAVDDLRKLVISLQARVESLEASEPSVSKS
AAPKAAAPAPAPAEDSDDGVDLFGSDDEEESAEAAKLREERLAAYNAKKSKKPVLIAKSN
IILDVKPWDDETDMKAMEDAVRTISIDGLLWGAAKLVPLAFGIHKLQISCVVEDDKVSID
WLTEEIEKLEDFVQSVDIAAFNKV