| Genomic Position | scaffold146:+ 64424-66878 |
|---|---|
| See gene structure | |
| CDS Length | 1278 |
| Paired RNAseq reads | 2425 |
| Single RNAseq reads | 5487 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009308 (8e-131) |
| Best Drosophila hit | CG3925 (1e-36) |
| Best Human hit | protein cereblon isoform 1 (3e-43) |
| Best NR hit (blastp) | PREDICTED: similar to cereblon [Apis mellifera] (3e-61) |
| Best NR hit (blastx) | PREDICTED: similar to cereblon [Apis mellifera] (2e-55) |
| GeneOntology terms | GO:0004176 ATP-dependent peptidase activity GO:0006508 proteolysis GO:0071600 otic vesicle morphogenesis GO:0000151 ubiquitin ligase complex GO:0035118 embryonic pectoral fin morphogenesis GO:0005737 cytoplasm GO:0005634 nucleus GO:0033333 fin development GO:0071599 otic vesicle development GO:0060173 limb development |
| InterPro families | IPR015947 Pseudouridine synthase/archaeosine transglycosylase-like IPR003111 Peptidase S16, lon N-terminal |
| Orthology group | MCL11437 |
Nucleotide sequence:
ATGTTAATAGTGGCTTCCGACGGGGAAGAAGAGAGAAATGGTGAAGGTAATGGCGAATCT
GAAGAGGAGCAATTTGATATTTCACTTGCAGCCTCACATTCGTACATGGGAAACAGCCTG
GTAGCAGTGAGCGGTCGCTCAGTGTTGGAGGCGGGTTGGGTGGGCCGAGTTCCGGTGGCA
GCACACCATGGCACAGTATTCCCTGGCGAAACGGTGCCCATGCTCCTCACCCATCCCCAC
GACGCCGCCATCATCACGCGTGCCATCAAGCATAACAAGCTATTTGGCCTGCTCTGTCCT
GATGAAACTGGCAGCCTGGTGTCCGGGTACGGCGTCTTGTGCGAGGTGTTCGAGGCGGGA
GTGGGTGCCGACGACGAGCCCCCGCGCACGCTCTCTTTTAAGGCACGCGCCACTCATCGC
TTCCGCTGCCTCCACATGCCCAAGCATTCGGTGCCCATACACATGTACTCCAGGATGCGT
GCCGTTGACGTGCGCGTGCTACCCGAAGTCCGACTCGGGGAGCCCCTGAGACACGCGCGA
CTCGCCAGCCTCGACACCCTAAGGCGGTCAACGTCGGACGGTCGCCTACGCTGTATGGAT
GCAGCCGTGACGCCGTGGCCGCTGTTCGTGTACGACATTTTCGACTACCGCCGCATGAGA
CGGATCATCGAGGACTACTTCAGGACCATGTCGCTAGGTCACGTTACGCTCTGTTTCGTT
TCAGAGAACCTGCCGGAGGAGGCGGTGTCTCTATCGTTCTGGACGGCGTCCAACTTGGCG
CTGTCGGCGCGCGACCGCCTGGCCCTGTTCGTGGTGGACGACGCTCTACTCCGCCTGCAC
ATGGAGGTGCGACTCATCACCAGGAAGAGCGTGTTGTGCTGCGCATCGTGCGCGACGGTG
GTGGCTCGGCGGGAGGACATCTTCGCCATGTCGAGCGAGGGCGTGCATGCCAACTACAGC
AACCCGGGCGGCTACATGCACGACATAGTGACGGTGTCCCGCGCCTCCAACACGGCCCCC
GGCGGCGCGCCTTCCTCCGAGTTCTCGTGGTTCCCGGGCTACTCGTGGACGGTGGCGCTG
TGCTCCTCGTGCACCTCGCACGTGGGCTGGAGGTTCGACGCGCGGCGCCGGACCCTCCGG
CCGCAGCACTTCTACGGCCTGTGTCGCAACTTCGTGCGGCCGCGGTGCGACGGAGACTCC
TCGCCCGCCTCGTCCCCCACACCCTCGGCCTCCCCGCCCGCCGCCGAGCCGGAGGACGAG
TCGCTCCGAGACTCGTGA
Protein sequence:
MLIVASDGEEERNGEGNGESEEEQFDISLAASHSYMGNSLVAVSGRSVLEAGWVGRVPVA
AHHGTVFPGETVPMLLTHPHDAAIITRAIKHNKLFGLLCPDETGSLVSGYGVLCEVFEAG
VGADDEPPRTLSFKARATHRFRCLHMPKHSVPIHMYSRMRAVDVRVLPEVRLGEPLRHAR
LASLDTLRRSTSDGRLRCMDAAVTPWPLFVYDIFDYRRMRRIIEDYFRTMSLGHVTLCFV
SENLPEEAVSLSFWTASNLALSARDRLALFVVDDALLRLHMEVRLITRKSVLCCASCATV
VARREDIFAMSSEGVHANYSNPGGYMHDIVTVSRASNTAPGGAPSSEFSWFPGYSWTVAL
CSSCTSHVGWRFDARRRTLRPQHFYGLCRNFVRPRCDGDSSPASSPTPSASPPAAEPEDE
SLRDS