| New model in OGS2.0 | DPOGS212149 |
|---|---|
| Genomic Position | scaffold2185:- 11558-14346 |
| See gene structure | |
| CDS Length | 1185 |
| Paired RNAseq reads | 46 |
| Single RNAseq reads | 153 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006602 (2e-127) |
| Best Drosophila hit | ND |
| Best Human hit | poly(A)-specific ribonuclease PARN-like domain-containing protein 1 precursor (2e-31) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC011836 [Tribolium castaneum] (4e-50) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC011836 [Tribolium castaneum] (4e-51) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0005634 nucleus |
| InterPro families | IPR012337 Ribonuclease H-like IPR006941 Ribonuclease CAF1 |
| Orthology group | MCL18038 |
Nucleotide sequence:
ATGGATATAACGAACAAAAACTTTAATCAAGAATTTGATAGCATAATCAAATGTTTGAAA
AAGTCTTGTTTCATTGGCTTTGACGCAGAATTTACAGCTATATTATCGGGAGAATGTTTT
AAATATAGATTGTTCGATACTAATAAAGAAAGATATGACCGAATGAAGGATGAAGTCTGT
AAGATGATAATGAATCAAGTTGGTCTAACAATGTTTCAGTATGATCGGGATAATGACAGA
TATATCTCCCATACCTACACATTCCACCTCTGTCCCCAAGTATTTGGTGACATCAATCAG
TCCTTTACATTCCAAGCATCAGCCATTAGATTCCTTTGTCTGCACAATTTTGATTATAAC
AAGTTTACATATGATGGTCTCCCCTATATGAGTCGATCCGAAGAAGCTCATATAAAGAAA
CAGCTGAAGGAAAAAACACTTCTTAATAATCTGATACAAGCAATGGAAATGAATGATGAG
AGGAAACTTCAAAGCTACTGTTCCGAAGTCGCTAAATGGCTCGTAAATAGTACTGATGAC
ACAATATACCTGGATATTGACAATCCCATAATGAGATACATAGTGCACTGTGAATTGAGG
AATCGCTTCCCAGAGGTCCTGACAACTGATAGCTTAGGTAATAGTCATAAGGTCCTGATA
TATAGAAATGGTGACGTAGATGGCGCCACCAGCGCTTCTATGTCAACACTAGAAGGAAAC
CTAATAACTTACGTCCTAGGTTTCTCACAAATCATAGAGCTTCTAGCGGAATACAAGAAA
CCAATCATCGGCCACAACATGTACCTAGACACATTATTACTACACAGCCAATTCATAGGT
CCGTTGCCTAAAAGATATTCTGCATTTAAGAAGAATATTAACAACCTATTTCCTAATATG
TATGACACCAAGTACATCTCACACGAAATGGGCAGGAAGCTGACACTCGATGAAGTATGG
AAGTCTAATGCACTGCAAGATTTATATGAATTCTTCTATGAGGGTAAATGTAAGAAGTTG
CAGAAGGGTTTAAGTCAAATAAAACTGAATACTCCATTTGATGTGAAACAATCATATCAC
GAGGCCGGTTGGGATTCATATTGCTCAGCCATAATACACTTCTTCCTCTTTTGGTTAGCA
GCGTTTCCTTATATTTGCCAATGTCATGTGCCGATATCATACTGA
Protein sequence:
MDITNKNFNQEFDSIIKCLKKSCFIGFDAEFTAILSGECFKYRLFDTNKERYDRMKDEVC
KMIMNQVGLTMFQYDRDNDRYISHTYTFHLCPQVFGDINQSFTFQASAIRFLCLHNFDYN
KFTYDGLPYMSRSEEAHIKKQLKEKTLLNNLIQAMEMNDERKLQSYCSEVAKWLVNSTDD
TIYLDIDNPIMRYIVHCELRNRFPEVLTTDSLGNSHKVLIYRNGDVDGATSASMSTLEGN
LITYVLGFSQIIELLAEYKKPIIGHNMYLDTLLLHSQFIGPLPKRYSAFKKNINNLFPNM
YDTKYISHEMGRKLTLDEVWKSNALQDLYEFFYEGKCKKLQKGLSQIKLNTPFDVKQSYH
EAGWDSYCSAIIHFFLFWLAAFPYICQCHVPISY