| New model in OGS2.0 | DPOGS212590 |
|---|---|
| Genomic Position | scaffold3793:+ 47-1593 |
| See gene structure | |
| CDS Length | 504 |
| Paired RNAseq reads | 16 |
| Single RNAseq reads | 138 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005193 (6e-37) |
| Best Drosophila hit | neither inactivation nor afterpotential B (7e-29) |
| Best Human hit | beta,beta-carotene 15,15'-monooxygenase (2e-10) |
| Best NR hit (blastp) | neither inactivation nor afterpotential B [Galleria mellonella] (5e-34) |
| Best NR hit (blastx) | neither inactivation nor afterpotential B [Galleria mellonella] (8e-34) |
| GeneOntology terms | GO:0007604 phototransduction, UV GO:0007603 phototransduction, visible light GO:0016063 rhodopsin biosynthetic process GO:0007602 phototransduction GO:0003834 beta-carotene 15,15'-monooxygenase activity GO:0035238 vitamin A biosynthetic process GO:0009110 vitamin biosynthetic process GO:0016119 carotene metabolic process |
| InterPro families | IPR004294 Carotenoid oxygenase |
| Orthology group | ND |
Nucleotide sequence:
ATGGCTTGTAGACCTTACAGATACTTTTACGCTATCAGCTCTGACGTCGACGCTGAGAAT
CCTGGATTGATAATAAAAGTCGACACAGTCACCGGTCAAACTCAGACCTGGTTTAATAAT
AACTGTTATCCGAGCGAGCCCGTCTTCGTGCCTCGTTGCGACGGAAAGTCCGAGGACGAC
GGTGTTCTTCTAACCGCTCTGGTGAAGGCTGACGACTCTCACTCAGTCTCCCTGGTATGT
CTGTGCGCCGTCACCTTAAAGGAGCTCGCTCGGTGCACCTTCACGACACCGTCTCCAACT
CCTAAGTGCCTTCATGGGTGGTTTCTACCCGACTCCGAGGACGACGGTGTTCTTCTAACT
GCTCTGGTGAAGGCCGACGACTCTCACTCAGTCTCCCTGGTATGTCTGTGCGCCGTCACC
TTAAAGGAGCTCGCTCGGTGCACCTTCACGACACCGTCTCCTACTCCTAAGTGCCTCCAT
GGGTGGTTTCTGCCCGACGTATAA
Protein sequence:
MACRPYRYFYAISSDVDAENPGLIIKVDTVTGQTQTWFNNNCYPSEPVFVPRCDGKSEDD
GVLLTALVKADDSHSVSLVCLCAVTLKELARCTFTTPSPTPKCLHGWFLPDSEDDGVLLT
ALVKADDSHSVSLVCLCAVTLKELARCTFTTPSPTPKCLHGWFLPDV