| New model in OGS2.0 | DPOGS212591 |
|---|---|
| Genomic Position | scaffold3793:+ 5763-10435 |
| See gene structure | |
| CDS Length | 1515 |
| Paired RNAseq reads | 488 |
| Single RNAseq reads | 1200 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005193 (4e-108) |
| Best Drosophila hit | neither inactivation nor afterpotential B (1e-88) |
| Best Human hit | beta,beta-carotene 15,15'-monooxygenase (4e-74) |
| Best NR hit (blastp) | neither inactivation nor afterpotential B [Galleria mellonella] (2e-177) |
| Best NR hit (blastx) | neither inactivation nor afterpotential B [Galleria mellonella] (2e-170) |
| GeneOntology terms | GO:0007604 phototransduction, UV GO:0007603 phototransduction, visible light GO:0016063 rhodopsin biosynthetic process GO:0007602 phototransduction GO:0003834 beta-carotene 15,15'-monooxygenase activity GO:0035238 vitamin A biosynthetic process GO:0009110 vitamin biosynthetic process GO:0016119 carotene metabolic process |
| InterPro families | IPR004294 Carotenoid oxygenase |
| Orthology group | MCL11024 |
Nucleotide sequence:
ATGTCTGACACGGAAAGATTATACGATTACAATATGAATATATGGCTGAGGAATTGTGAG
GAGGAGATACAGGAACCGATACGTGGAGAAGTGACGGGTAAACTTCCCTCATGGCTCCAA
GGTACTCTCGTCAGGAATGGTCCGGGACGAAATAAAATCGGTGATTGTGAATATGAACAC
GTCTTTGACGGACTGGCTTTGTTACACAGGTTTGATATATCGGAGGGTCAAGTTACTTAT
CAATGTAAATTCGTGAAGTCTGAGACATACAGAAAGAATATGGCAGCCAATCGCATCGTG
GTCACAGAATTCGGCACGACGGCTGTACCGGACCCCTGTCGCAGTATTTTTGACCGTATA
TCCTCAACGTTCAGATTGAATCGAGATAGAACAGATAACACGGCGGTATCTATTTATCCC
TTTGGGGATCAAATTTATGCGATGACCGAAGTACCCGTTATTTACGAAATAGATCCCAGA
AACTTAGAAACTGTTGGCAAGAAAGAAATAGAGAAGTCTTTAATAGTATGTCACACCGCT
CACCCACATGTGATGCCAAATGGAGACGTTTACAATCTAGGAATGAGTAAAACAAATGGT
CTTAAACACGTAGTCGTTAAGTTTACATACAGTGATAAAGGAGATATGTTTGAATCAGCG
GAAATAGTCGCCAGCATGACTCCCAGGTGGAAACTCCATCCGTCATACATGCACTCATTT
GGCATAACGGAAAACTACTTCGTGATAATTGAACATCCGTTATCGTTGTCTTTATTGGGT
ATGGCTCGGAGAGTATTTATCACCGCCCCGTTTTCCTCCGTCCTGCACAGCTATCCAGAT
CAAGACACTCAAATAGTCCTTATCAACAGAATAACCGGCGAGGAGACCAGATACACAACA
GACACCATATTTTATATGCACATCATCAATTGCTTTGAATCGGAAGGGAAAGTTATTATT
GATTTGTGCAGTTACAAAGACGGAAAAATCATTGAATCCATGTATACACGAGCTATAAAA
TCAATGCAATCTAATCCGGAGTACGGTGAATGGTGCGAGTGTCGTGCAAAACGCCTCGAA
ATACCTCTGGACGCGGTCGACTGTAAGGTGGAAGCCAAGTTGATCGCTGATGTTGGATGC
GAGGCTCCGAGAATCAATTACGATGTTTGTAATGCTAAACCGTACAGATATTTCTATGGC
ATCGGTTCCGACATTGGTAGAAGTGACTCTGGCAATCTCGTGAAAGTGGATACAAAAACC
GGTGATTACAAAATATGGTTAGAAGAAGACACCTATCCAAGTGAACCGATTTTCGTGCCT
CGTCCGGAGGCTGTGGATGAGGATGACGGTGTGCTCTTAAGCGCTCTCGTATGGGGAAGG
GATGATCACGCGATAGCTTTACTAGTTCTGGATGCTCGCGATTTGAAAGAAATAGCACGT
GTTTGCTTCAAAACCCCCTCGCAGGCAACCAGGTGCTTCCATGGGTGGTTCCTACCCGGC
CAACAACTTAAATAG
Protein sequence:
MSDTERLYDYNMNIWLRNCEEEIQEPIRGEVTGKLPSWLQGTLVRNGPGRNKIGDCEYEH
VFDGLALLHRFDISEGQVTYQCKFVKSETYRKNMAANRIVVTEFGTTAVPDPCRSIFDRI
SSTFRLNRDRTDNTAVSIYPFGDQIYAMTEVPVIYEIDPRNLETVGKKEIEKSLIVCHTA
HPHVMPNGDVYNLGMSKTNGLKHVVVKFTYSDKGDMFESAEIVASMTPRWKLHPSYMHSF
GITENYFVIIEHPLSLSLLGMARRVFITAPFSSVLHSYPDQDTQIVLINRITGEETRYTT
DTIFYMHIINCFESEGKVIIDLCSYKDGKIIESMYTRAIKSMQSNPEYGEWCECRAKRLE
IPLDAVDCKVEAKLIADVGCEAPRINYDVCNAKPYRYFYGIGSDIGRSDSGNLVKVDTKT
GDYKIWLEEDTYPSEPIFVPRPEAVDEDDGVLLSALVWGRDDHAIALLVLDARDLKEIAR
VCFKTPSQATRCFHGWFLPGQQLK