| Genomic Position | scaffold176:- 8783-34404 |
|---|---|
| See gene structure | |
| CDS Length | 1260 |
| Paired RNAseq reads | 688 |
| Single RNAseq reads | 1782 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007995 (5e-09) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (3e-167) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (1e-155) |
| GeneOntology terms | GO:0006278 RNA-dependent DNA replication GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10012 |
Nucleotide sequence:
ATGCACCCACCGTATAATATTTATGATTGGCGGAAATCGCTCATTAGTGATGTGCTTATA
GCCTCCGATATGATAAATGCAGCGACAGTTCCGATTGTAAGGACAAATGTGAGAATGACT
GCACAGCGGACTGCTCGACAACCGGCGTGGAGACCGCGTCTCGGCAAACGTAGTGTAGGA
CGTCCTCAGGCAAGGTGGAGTGACGATTTGCGCAAGATGGCTGGCAGGAGCTGGATGCGA
GTAGCCGAAAATCGATCTCAGTGGCGTGCAATTGGAGAGGCCTATGTCCAGCAGTGGGCC
AGGATCCCTGAGGCCTATATTGACATCATCAGAGACATGTACCGCGATTCCGTTTCAATG
GTTAGGACTGCTGTTGGCGATACAAAACCCTTTCCGATCTCAGTAGGGGTTCACCAAGGC
TCGGCTCTTAGCCCCTTCTTGTTCAATGTAGTGCTGGACACTGTCTCGGCTAACATCCAG
GACCAGCCTCCATGGCTGATGATGTATGCCGATGACATAGCGCTCATTGATGAGAGCAGG
TTGACGCTAGAGCGAAGAGTGAACCTCTGGAAGGGTACGCTTGAGAACGGTGGTCTTAAA
CTAAATGTGACGAAGACCGAGTACATGGCTTGCGGAAGCCCGGACTCTTGCACTATCCAT
ATAGGTCCTGAACCAGCCGTTAAGTCGGAAAAGTTCAGGTACCTTGGATCTATTCTGCAT
GAGTCCGGAGGCATCGATCACGATGTCCAAGCCCGGATCAGCGCTGCTTGGGCGAAATGG
CGTGAGGTCACAGGTGTGGTCTGCGATCGCAGAATACCTACCAAGCTCAAGGGAATAATA
TACAAGAGCATAATCCGACCGGTTCTCTTATATGGAAGCGAATGTTGGCCAACACTGTCC
AGGCACACTCAGGAGCTTCACGTCACGGAGATGAAGATGCTGAGGTGGATGTGTGGCGTA
ACGCGGGCTGACCGTATACGTAACACATTTATCCGAGGTAGTCTTGGAGTCCGTGACGTA
GCGGATAAGCTTCAAGAGAGTCGCCTGAGATGGTATGGCCACGTTGCACGCCGGCCTGAG
AATTACGTCGGAAAAATTTGCCTTGATATGTCGGTCCCTGGAGCAAGACCCCCAGGACGC
CCAAGAAAGCGATGGCTGGACACCGTGAAGCAGGATATGAGAGCCAATGGACTTACCACC
GCGGATGCTAAAGATCGTGCAAAGTGGAGGAGTTTAAGCAGGAAGGCAGACCCTGGCTAA
Protein sequence:
MHPPYNIYDWRKSLISDVLIASDMINAATVPIVRTNVRMTAQRTARQPAWRPRLGKRSVG
RPQARWSDDLRKMAGRSWMRVAENRSQWRAIGEAYVQQWARIPEAYIDIIRDMYRDSVSM
VRTAVGDTKPFPISVGVHQGSALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESR
LTLERRVNLWKGTLENGGLKLNVTKTEYMACGSPDSCTIHIGPEPAVKSEKFRYLGSILH
ESGGIDHDVQARISAAWAKWREVTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLS
RHTQELHVTEMKMLRWMCGVTRADRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRPE
NYVGKICLDMSVPGARPPGRPRKRWLDTVKQDMRANGLTTADAKDRAKWRSLSRKADPG