| New model in OGS2.0 | DPOGS200997 |
|---|---|
| Genomic Position | scaffold2305:- 2411-3432 |
| See gene structure | |
| CDS Length | 942 |
| Paired RNAseq reads | 35 |
| Single RNAseq reads | 132 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009066 (5e-75) |
| Best Drosophila hit | CG42598 (2e-52) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to CG15786 CG15786-PA [Acyrthosiphon pisum] (2e-60) |
| Best NR hit (blastx) | PREDICTED: similar to CG15786 CG15786-PA [Acyrthosiphon pisum] (3e-63) |
| GeneOntology terms | GO:0019028 viral capsid |
| InterPro families | IPR004302 Chitin-binding, domain 3 |
| Orthology group | MCL40369 |
Nucleotide sequence:
ATGGTCGTATCTGTTGTCGGCCACGGCCGTGTGCTCCAACCCCCATCCCGCGCCTCCATG
TGGCGGAGTGGGTTCCCAACCCCTCACAACTATGATGACGATGGACTTAACTGCGGTGGC
TTCTATAGACAGTATACCATAAACAAGGGAAAGTGTGGAATCTGCGGAGACGCCTACGAT
ATGAAGCCCCCAAAAAGCCATGAACTCGGTGGCAAATATGGCCAAGGAATTATTGTTTCA
AATTTCGAGCCAGAGCAAATTTTTACAGTCACAGTAGAAATAACGGCCTATCATAGAGGC
TACTGGTATTTTAAAATATGCCCAAATCCGAAGACTAACCGGCAATCCTGCTTCGACAAA
TATCCAGTGGAACTGGCGACGGGTGGCACAAATTTCTATCCTTCAAAAGGTGGTGTATAT
AAAGTGAAGTATCGTCTTCCTAAAGGTTTAGTCTGCGACCACTGCGTGCTACAGTGGAGG
TATGTAGCTGGAAATAACTGGGGTTTCTGTGGGAACGGGACCTCGGGGCTGGGATGTGGC
AACCAAGAAACTTTTGGCGCCTGTTCTGATATTTCTATTAGCGAGAATTCTATCGATACC
GATGCTCGTCCAGTGAAGTTTGCTACTGCTTCAAACGATATAAGTGAAGGTAAAATATCT
TTACTAATTTCTTACTTACATGTTAAATTACCTAGTATTTACCTGACTAATTTTATTATA
TCTACAATTATTGCACAATCAAAATGGTGTAAATACGTCGCTTGTGACAATTCGCGAATA
AAATTTATACCTTTACAGCCCCAATATAACACTGTAATGAATATTGTCTTTGATTGCACT
ATAATAATAGAAAAGATTAGATTATGTGACGCTAACTCTTTATTGTTTATCTTGAATTAT
AAAACGTCGTTGACAGCAACTAACTACCTGCCTGACAGATAA
Protein sequence:
MVVSVVGHGRVLQPPSRASMWRSGFPTPHNYDDDGLNCGGFYRQYTINKGKCGICGDAYD
MKPPKSHELGGKYGQGIIVSNFEPEQIFTVTVEITAYHRGYWYFKICPNPKTNRQSCFDK
YPVELATGGTNFYPSKGGVYKVKYRLPKGLVCDHCVLQWRYVAGNNWGFCGNGTSGLGCG
NQETFGACSDISISENSIDTDARPVKFATASNDISEGKISLLISYLHVKLPSIYLTNFII
STIIAQSKWCKYVACDNSRIKFIPLQPQYNTVMNIVFDCTIIIEKIRLCDANSLLFILNY
KTSLTATNYLPDR