| New model in OGS2.0 | DPOGS212155 |
|---|---|
| Genomic Position | scaffold378:- 27471-28317 |
| See gene structure | |
| CDS Length | 756 |
| Paired RNAseq reads | 408 |
| Single RNAseq reads | 1178 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006735 (2e-123) |
| Best Drosophila hit | CG8549 (1e-81) |
| Best Human hit | ribosome maturation protein SBDS (6e-83) |
| Best NR hit (blastp) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (1e-113) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (1e-109) |
| GeneOntology terms | GO:0000922 spindle pole GO:0001833 inner cell mass cell proliferation GO:0003674 molecular_function GO:0005515 protein binding GO:0005575 cellular_component GO:0005634 nucleus GO:0005730 nucleolus GO:0005737 cytoplasm GO:0006364 rRNA processing GO:0007612 learning GO:0008017 microtubule binding GO:0008150 biological_process GO:0019843 rRNA binding GO:0030282 bone mineralization GO:0030595 leukocyte chemotaxis GO:0042254 ribosome biogenesis GO:0043148 mitotic spindle stabilization GO:0048539 bone marrow development |
| InterPro families | IPR002140 Ribosome maturation protein SBDS IPR018978 Ribosome maturation protein SBDS, C-terminal IPR019783 Ribosome maturation protein SBDS, N-terminal IPR018023 Ribosome maturation protein SBDS, conserved site |
| Orthology group | MCL13263 |
Nucleotide sequence:
ATGTCAAAAATATTTACACCCACAAATCAAATTAGATTAACGAATGTGGCCATAGTTAGA
TTAAAGAAAGGTGGTAAAAGATTCGAAATAGCATGTTACCGGAATAAAGTGGTATCATGG
AGGAATAAGCTGGAGAAAGATATCGATGAAGTTCTTCAAACACATACTGTATTCCTAAAT
GTATCGAAAGGACAGGTTGCTAAAAAAGAGGATTTAATTAAAATCTTCGGCAAAGACGAT
CAAACTGAAATATGCAAAGAAATATTAGAAAAGGGAGAACTTCAAGTTTCAGACAAGGAA
CGACAATCCCAAATTGATTCTCTGTTCAAAGATATAGCAACGACTGTAGCTGACAAATGC
ATTAACCCAGAAACAAAAAGACCTTATCCAGTTTCTATAATTGAAAAAGCTATGAAAGAT
ATACATTTTTCAGTAAACGTAAACAAAAGTGCCAAGCAACAGTCGCTTGATGTGATACAA
TTAATAAAGAAAGAAATACCTCTTGAGCGAGCACAAATGAGAGTCAGAATTCAATTACAA
GGGAAAGATGCTCGTAAAATAAGAGACAAAGTTGTTAAATTGGTTACAAATGTAGAGGAT
GAGTCTTGGGATTCCGGCACTGCCAACTTAATATGTCTTATAGACCCTGGGAGCTTCAGG
AATTTAGATGAAATGATAAGAACAGATACAAAAGGGAACGGGCAGTTCGAGTTATTGAAT
CTAAAAGAAATGATTGAAGGAGAGCAAGCTTTGTAA
Protein sequence:
MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYRNKVVSWRNKLEKDIDEVLQTHTVFLN
VSKGQVAKKEDLIKIFGKDDQTEICKEILEKGELQVSDKERQSQIDSLFKDIATTVADKC
INPETKRPYPVSIIEKAMKDIHFSVNVNKSAKQQSLDVIQLIKKEIPLERAQMRVRIQLQ
GKDARKIRDKVVKLVTNVEDESWDSGTANLICLIDPGSFRNLDEMIRTDTKGNGQFELLN
LKEMIEGEQAL