| New model in OGS2.0 | DPOGS212031 |
|---|---|
| Genomic Position | scaffold1326:+ 51861-73917 |
| See gene structure | |
| CDS Length | 3159 |
| Paired RNAseq reads | 1565 |
| Single RNAseq reads | 4475 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005351 (2e-16) |
| Best Drosophila hit | CG7397 (1e-130) |
| Best Human hit | rho guanine nucleotide exchange factor 17 (9e-84) |
| Best NR hit (blastp) | GI23633 [Drosophila mojavensis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to ENSANGP00000005626 [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0035023 regulation of Rho protein signal transduction GO:0005622 intracellular GO:0005089 Rho guanyl-nucleotide exchange factor activity |
| InterPro families | IPR000219 Dbl homology (DH) domain IPR011993 Pleckstrin homology-type IPR015943 WD40/YVTN repeat-like-containing domain |
| Orthology group | MCL11023 |
Nucleotide sequence:
ATGAGTCGTGAGTCTCTGAAGTTGAAGTTCAGCGATCAACGGGCGGCCCTTAGTCTGTCC
TTCCACGGTTCTGAGTCTGATGATGAAATTACTGAGAGGAATATCAGGAGATCTAGAAGC
GGCACCGGCACAATGAACGCTGCGGCCCTACCCTCGATATCCGCCGGCCTACCGTCGGCT
TTACTTGCTGCTCAAGACACACGGACACACGTGGTCGTCGAACTTTACGAGACGGAAAAA
TCTTATGTGGAGGCGCTCGAAAACTTAGTCAAGAAATACCTCCAACCGCTTAAAAGTCCA
GAGAACGCTGGACTCTTAGATGCCTATTTGGTGGATGAAATATTCTACCAAGTACCGGCT
ATCCTCAACGTGCACCAAGTATTCCTCGAACAACTGAGGCTAAGACTTGAGCAATGGGAC
CTCCAGCAAAAAGTTGGGGACGTGTTCCTCGAAGTGTTTACCTTTGGGTGGCATTACCTG
TGGATCATGTCCTTTATCAACAACCTGAAAAAGGCCAAGGAAACGATAAAATCCGCAGCG
GCATCGCGACCTGCTTTTGCAAAGTTTTTGGAAGCACGTGCAAGAGACCACAAGGGAAAG
TTGTCTTTAGACAATCTCTTAATAAAGCCAGTACAGAAGTTTCCAAGCTATAAGCTTTTG
ATTCAAAGATTGATTAAACACACAGAGCAGTCGCATCCTGACCACAAACTATTGTTGGAA
GCTCAGAGGGAGATTCACGATCTCTTGGAACTTATAAATTGTACTGAAAGAGAAAGTCTC
GAACAAGAACAACAGCAACAGACTCTGAGGGAATTAGAACAATTGATAGAAGGTCTCTCT
AATTTAGTGTCGGCTGATAGAACATTCATTAGGCACGAGATGGTTACAATGCCGTCAGCG
CAAGGAGCTGTTAAAGACAGAGCTTTATTCCTCTTTAACGACACTCTTTTGATAACAAGT
GTCAAGAAAAGGACTGGTACCATAAAGAAACCGATTCCGACATACCAATGCAGCATCGCG
AGTCAAATGGAAGGGAACAAATATAAGCTTCTGATGAGGATATCTCTCGGAGACTTGGAA
ATCGTGAAAGGAAAAGACGAAAACATGAGACGCTTAATCCATGAAGTGGAAACACTTACA
GAAGATGTCAATACATTGACTGTTATATCAGAACAAGTGGCCGCTCTACACACCCAGCAT
CTTCCTTTAGAAGAGCTGGTCAGAGAAATGTTACAATCGGCCAATAGACAGCTATCTGAG
AGACAGAATTTTGATAATCAACTATGCTGTATGGAACTAACTTTGAATACCTCAAACGTC
CCAGAGAATTTGACGGTGATATTTGCTAATTCGGAAAAGAGGAGCAATTGGGAGGAACTC
ATAAACGAGACGAAGCAGAAGCTATATATGTACGGCCCAGAGCGTCCGGCGCCCGAGTTT
CTCTCCCCTGTCCCTATAAGGAAGACGAGAGCCGGCCTACAGTTCACATGCGCTGCCCCT
ACACTACCCCCGAAAGGACAACCGCCTGATGTTTGGGTTTGCAACAGCGACGGGTATGTC
GGTCAAGTGTGTGTTCTGACTTTGAATCCTAAGCCGCAAGTGACATCTTGCAATGGCGTC
TGTAATGCTAGGATCGTATGCGTTGCTTGCGTACCACCCGCACCGGCCCTCGTTCGCCAG
CAGACATTAGACATACCGAGTACCAGCTCGTTGAACAGTTCCGGTAATAAGCCTGGTATA
AGTATTTCTGATGCTGATGAAAGCTGCAAGAATATACGTCTTGACAGCTCATCATCTAGT
GAAGACGAGGACGATGGCTCGTCCACCAGCGAGAATCAAGACGCCCAGTCCGAAAGAAGC
CAGGACTCTGTTCGTCTGCACAGCCTCAGTGCGATCGGGGCCAGGGCGACGCTGACGCCT
AACCATAGCAAGAGTCTGAGCACGCCTCACACCGGACAGAACATACCGATACACCCAGTC
ATGAAGTCCAGCTCGAATCCCGCTGTCGACAAACAGGCTATGGGAATCACATCCGGCACA
TTATCGTCACCAGCCAGTCGCCAGTCCTCGGAGGACAACGCTACGAATCAGCCAACAATG
TGGCTCGGGACCGAAGACGGCTTCATTCACGTCTACAACTGCATGGACAACATACGCATC
AAGAAGAACAAGATTAAGCTACAGCACAGCGCCTCTGTGATATCCATCAAATACGTCGAG
GGTCAAGTGTTCGTGTCTCTTGGTAACGGTGAATTGGTCGTGTATAACAGAGATATTGAT
GGTACATGGTCAGAGCGCGCTACGCTGGTGGTAGGTGGTAGCTCTAACCCAATATCCGCC
ATGTTGGTGGTCGCTACGCGTCTCTGGTGCTCAACACAGTCCTACGTTAAAGTCATCAAT
CCGCATACGCTGCAGGAGGACGGTTCATTTCAAGTGCCCACTCACAGTCGTCAGATCAGT
CACATGGCCATCTCCGGTAACACCATATGGCTGGTGCTCAACCCGACGCATAAACAGTCG
CAGGAGGACGATACATTCCACGTGACCACAGACACTCGTCCCATCAGTCATATGGCTGTT
GCCGGCACCTCTTTGTGGATGGCCCTCAACACGACTCCCCAGCTCCGATGCTATCAGACA
AATTCCAAGGAACTGCTAGCTGAACTGAGCATCACAGCGCCCGTCACTAAAATGCTGCAT
GGATGCGACGACATTATCCGCCAACATAAGGCGGCTTGTCTGCGAGTGACGGCTTTATTG
GCACATCGAGATACCTTGTGGGTTGGAACGTCTGCTGGCGTGTTGCTCACAGCGCCGCTA
CACAACTCGCCCAACACACGAACCGGACAGTTCACTGTGCCACAACTCACCGGGGTGACT
TACGGTCACACTGGACATGTTAGATTTTTGACAATCGTCGAAAATCCAGTTCCGCATAAG
CCAACAACGAAACCAAGCACGAGCTTGAAGACGAAGGCTCTGAGTCGACGATCGACGAAC
GCTGAGAAACTACAGAAGCAGACAGAAAGCAGCCCGAACAATAAGGAGACTTTGGTGATA
TCTGGAGGGGATGGCTACGAGGACTTCAGGACGTCCTCCATGTCCGAGGACGCGGGGCGA
GAGGACTCCACAAATCACCTGCTATTTTGGAGGGTATGA
Protein sequence:
MSRESLKLKFSDQRAALSLSFHGSESDDEITERNIRRSRSGTGTMNAAALPSISAGLPSA
LLAAQDTRTHVVVELYETEKSYVEALENLVKKYLQPLKSPENAGLLDAYLVDEIFYQVPA
ILNVHQVFLEQLRLRLEQWDLQQKVGDVFLEVFTFGWHYLWIMSFINNLKKAKETIKSAA
ASRPAFAKFLEARARDHKGKLSLDNLLIKPVQKFPSYKLLIQRLIKHTEQSHPDHKLLLE
AQREIHDLLELINCTERESLEQEQQQQTLRELEQLIEGLSNLVSADRTFIRHEMVTMPSA
QGAVKDRALFLFNDTLLITSVKKRTGTIKKPIPTYQCSIASQMEGNKYKLLMRISLGDLE
IVKGKDENMRRLIHEVETLTEDVNTLTVISEQVAALHTQHLPLEELVREMLQSANRQLSE
RQNFDNQLCCMELTLNTSNVPENLTVIFANSEKRSNWEELINETKQKLYMYGPERPAPEF
LSPVPIRKTRAGLQFTCAAPTLPPKGQPPDVWVCNSDGYVGQVCVLTLNPKPQVTSCNGV
CNARIVCVACVPPAPALVRQQTLDIPSTSSLNSSGNKPGISISDADESCKNIRLDSSSSS
EDEDDGSSTSENQDAQSERSQDSVRLHSLSAIGARATLTPNHSKSLSTPHTGQNIPIHPV
MKSSSNPAVDKQAMGITSGTLSSPASRQSSEDNATNQPTMWLGTEDGFIHVYNCMDNIRI
KKNKIKLQHSASVISIKYVEGQVFVSLGNGELVVYNRDIDGTWSERATLVVGGSSNPISA
MLVVATRLWCSTQSYVKVINPHTLQEDGSFQVPTHSRQISHMAISGNTIWLVLNPTHKQS
QEDDTFHVTTDTRPISHMAVAGTSLWMALNTTPQLRCYQTNSKELLAELSITAPVTKMLH
GCDDIIRQHKAACLRVTALLAHRDTLWVGTSAGVLLTAPLHNSPNTRTGQFTVPQLTGVT
YGHTGHVRFLTIVENPVPHKPTTKPSTSLKTKALSRRSTNAEKLQKQTESSPNNKETLVI
SGGDGYEDFRTSSMSEDAGREDSTNHLLFWRV