| New model in OGS2.0 | DPOGS209941 |
|---|---|
| Genomic Position | scaffold128:- 391703-398096 |
| See gene structure | |
| CDS Length | 2769 |
| Paired RNAseq reads | 1195 |
| Single RNAseq reads | 3559 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011486 (1e-146) |
| Best Drosophila hit | CG5621, isoform B (3e-129) |
| Best Human hit | glutamate receptor, ionotropic kainate 2 isoform 1 precursor (2e-107) |
| Best NR hit (blastp) | ionotropic glutamate receptor subunit ia [Aedes aegypti] (2e-163) |
| Best NR hit (blastx) | ionotropic glutamate receptor subunit ia [Aedes aegypti] (4e-148) |
| GeneOntology terms | GO:0015277 kainate selective glutamate receptor activity GO:0006811 ion transport GO:0005234 extracellular-glutamate-gated ion channel activity GO:0016020 membrane |
| InterPro families | IPR001508 NMDA receptor IPR001320 Ionotropic glutamate receptor IPR001638 Extracellular solute-binding protein, family 3 IPR001828 Extracellular ligand-binding receptor IPR019594 Glutamate receptor, L-glutamate/glycine-binding |
| Orthology group | ND |
Nucleotide sequence:
ATGGAGAGTGTATGTTCAGGAGTGGCTGAAGGCATTCCTGAAGTTGCCGTCCTTCTGGAG
CAGGCCGTAGCCGCGGGTGGAGGAGCTGCGGCCGGGGAGCGCGGACAGAGCCTCGAACCC
TATGAACCCTTAGCGGTACCAGAACATATCTGCACTCAGGCCAGTGAAGGCTTACTGGCC
AGTGTCGGCGGTGTGGAGGCCGCGGATGCCGCGGCGCGGGCAGGCTTGCTGTTGTTGCTG
GCGTCTCCTGTCGCCGTCCCGTCCCCGGCGATGACCATCGCCTCCACCGAGCCGGACCAT
CCCTTGTCAGCAGCTCTTGAATTTTATCCACGATATGATGTTCTCGCAGAGGCCTGCGCA
GCTCTGTGTGAAGCGAAAGGTTGGAAGCACGCCGTGTTACTGCACGACGGAAGCGGCAGC
GCGGCGCCGCTCATAGTGCCCGATCACGACACCCTCGCGCTCCGTGTCCGCCAGCTGCCC
TCGAGAGAGGACGACGACGCCTTGAGGAATCTTCTCCTCGTACTGAAGAAGTTCGGTGCT
GTAAACTTTATCGTATGGTGTTCGGCGGAGTGCTCGGTGCGAGTGCTGGACGCGGCCCAG
CGCGTGGGGTTGCTTTCCGAGCGACACTCGTATTTGATGCTCTCGCTGGACCTGCATACA
CTGCCGCTCGAGGACTTCAGCTACGGTGGAGCCAACATCACCTCACTGCGTTTATTTGAC
CCTGAATCTTCTGCAGTAAATGTGTCTATGGAAAAATGGCAGCAACAGTATATAAATCTT
CTAGGAAACGAAGCAAATGAAGAAATTGATAAGATTATTTCGAATCCTCCGACTTCATTA
CTTTTATCATATGATGCTGCAAAAATTGTATCCGAAGGAATGGAGTACCTCGACCTTCCA
TTCATGGAAGACTCTCCGTCTTGCCAGCAAGGCACTGCCGCCTTCCACGCCGACACACTT
CTGAACTATTTACGATCGGAAGAAAACAGTGGCGCAACCGGACCTCTTTGGTGGGAAGCG
ACGGGAGCTCGCGGTGGTGTGCGACTACACGTGGCGGAACTGGAGCGAGGCGGGTTTCTG
AGAGCCGCAGGCGACTGGTCCCGGACGGGGGGACTGACGTGGCGGCCTCGACCACCCGCA
CCCCCGCCACCACCCGACGCCATGACCAACCGCACCTTCACCGTCCTCATCGCTCAGAAT
CAACCGTACGTCATGAGACAGCAGTCCTCCGAACGACTCTCAGGCAATGCGCGTTATGAA
GGCTTTTGTATAGAGCTGGTGGACCGTTTGGCTCAGCTGTTGCACTTCAACTACACGTTC
ATAGAGCAAGCGGATCGCGCCTACGGGTCCCTCAACAAGACCACCAAGCAATGGAACGGC
ATGATGAGGCGCCTCATGGATGATAAGAATGTAGACTTCGCTATAACGGATCTCACGATA
ACGGCGGAGCGAGAGGAAATCGTGGACTTCACGACGCCCTTCATGACATTAGGTATAAGC
ATCCTATTTCACAAACCTCAGCCTCCTGCACCGGAACTACTGGCCTTTCTGTTGCCCTTC
TCTAACGGGGTTTGGATGTGTCTGGGGCTGGCGTACGTGGGTTCGTCCTTGGTGCTGTAC
GTAGTGGGTCGGCTGTGCCCCGAGGAGTGGCAGAATCCCTACCCCTGTATCGAGGAGCCA
TCTGCACTCGAGAATCAATTCACTTTAGCTAATGCTCTGTGGTTTAACCTGGGAGCTGTA
CTTCAACAAGGTTCTGAAATCGCACCGATTGCTTACGGTACTCGTGCAGTGGCCAGTATT
TGGTGGATGTTCGCGTTGGTGATCACGAGTTCCTACACAGCCAACTTAGCCACGTTGTTG
GCCTCTAAGACCTCCACCGAGCTCATCCGCAACGTGCGCGAACTCGCCGAAAACGACCAG
GGCATCACTTACGGGGCGAAATCTAGTGGCTCAACTTACACTTTCTTTGAAATGTCAAGC
AGCGAACCATACAAAAGCATGTTCCAAAAAATGAAAGACGTCACAATGCCTTCGACTAAT
GAGGAAGGAATAGAAAAAGTAATGAATGAAAAATATGCGTTCTTCGCGGAGTCCACGACT
ATCGACTACACGACGGAACGTAACTGTGAGGTCACAAGAGTGGGAGATCTCTTAGATAGT
AAAGGATATGGCATTGCAATGAAAAAGAACTCACCGTACCGACAGGCGTTGAATCTAGCA
CTGCTGAATCTGCAAGAGGCGGGGATTCTTAGGGAGATGAAACATCGCTGGTGGAAAGAA
ATGCATGGGGGCGGTGCCTGTCAGGACAAGGAAGACCACGCCACCGAGAGACTAACAATC
GACAACTTCAAGGGTTTGATTCTCGTGTTGACGGTGGGCTGCGCTCTGGGTATAGTCATG
TCTTGTTGTGACTTAGCGTGGAGCGCCTGGCGTCATCCGCGCGATCCGACGCGGTCCTTT
GCTGCGAGCTTCTGGTCTGAGCTGCGATTCGTGTTCCGTTTCGAGCAATCAGAGAAGCCA
GTCCGCGGTGCCCTGACCCCAGCTCCCAGCTCGCACGATTCGCCTCCTTCGGCACACTCC
GAACGCTCGGAGTTGACAACGGGGAGTGGAGTCGACGGGAGGGGTAGGGGGAGAGAGGAG
GACGACAACCACGGAGAAGACGATGTGGGCTCACGCTTCTCAGCGCGCTCGCGACGGACC
AGCGCACGGCGATGTTCCATGCACGCCGCCAGTTTGAGACTGGCGAGACACACCACACCC
CGGCGATGA
Protein sequence:
MESVCSGVAEGIPEVAVLLEQAVAAGGGAAAGERGQSLEPYEPLAVPEHICTQASEGLLA
SVGGVEAADAAARAGLLLLLASPVAVPSPAMTIASTEPDHPLSAALEFYPRYDVLAEACA
ALCEAKGWKHAVLLHDGSGSAAPLIVPDHDTLALRVRQLPSREDDDALRNLLLVLKKFGA
VNFIVWCSAECSVRVLDAAQRVGLLSERHSYLMLSLDLHTLPLEDFSYGGANITSLRLFD
PESSAVNVSMEKWQQQYINLLGNEANEEIDKIISNPPTSLLLSYDAAKIVSEGMEYLDLP
FMEDSPSCQQGTAAFHADTLLNYLRSEENSGATGPLWWEATGARGGVRLHVAELERGGFL
RAAGDWSRTGGLTWRPRPPAPPPPPDAMTNRTFTVLIAQNQPYVMRQQSSERLSGNARYE
GFCIELVDRLAQLLHFNYTFIEQADRAYGSLNKTTKQWNGMMRRLMDDKNVDFAITDLTI
TAEREEIVDFTTPFMTLGISILFHKPQPPAPELLAFLLPFSNGVWMCLGLAYVGSSLVLY
VVGRLCPEEWQNPYPCIEEPSALENQFTLANALWFNLGAVLQQGSEIAPIAYGTRAVASI
WWMFALVITSSYTANLATLLASKTSTELIRNVRELAENDQGITYGAKSSGSTYTFFEMSS
SEPYKSMFQKMKDVTMPSTNEEGIEKVMNEKYAFFAESTTIDYTTERNCEVTRVGDLLDS
KGYGIAMKKNSPYRQALNLALLNLQEAGILREMKHRWWKEMHGGGACQDKEDHATERLTI
DNFKGLILVLTVGCALGIVMSCCDLAWSAWRHPRDPTRSFAASFWSELRFVFRFEQSEKP
VRGALTPAPSSHDSPPSAHSERSELTTGSGVDGRGRGREEDDNHGEDDVGSRFSARSRRT
SARRCSMHAASLRLARHTTPRR