| Genomic Position | scaffold5259:- 1457-9376 |
|---|---|
| See gene structure | |
| CDS Length | 2346 |
| Paired RNAseq reads | 76 |
| Single RNAseq reads | 495 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013345 (1e-41) |
| Best Drosophila hit | Ca[2+]-channel protein alpha[[1]] subunit D, isoform B (4e-34) |
| Best Human hit | voltage-dependent L-type calcium channel subunit alpha-1C isoform 4 (2e-26) |
| Best NR hit (blastp) | GH10399 [Drosophila grimshawi] (1e-33) |
| Best NR hit (blastx) | voltage-dependent p/q type calcium channel [Aedes aegypti] (1e-31) |
| GeneOntology terms | GO:0005891 voltage-gated calcium channel complex GO:0005245 voltage-gated calcium channel activity GO:0006816 calcium ion transport GO:0006936 muscle contraction GO:0042045 epithelial fluid transport GO:0016324 apical plasma membrane GO:0016323 basolateral plasma membrane GO:0009790 embryo development GO:0005509 calcium ion binding GO:0055085 transmembrane transport |
| InterPro families | IPR015880 Zinc finger, C2H2-like IPR007087 Zinc finger, C2H2-type IPR005821 Ion transport IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
| Orthology group | MCL13106 |
Nucleotide sequence:
ATGATTCTGACTACTATATTCGCTAATTGCATCGCCCTCGCCGTCTACACTCCCTACCCC
GCCAGCGACTCCAACTACACGAACTGGGTTCTGGAGAAAATAGAATACATTTTCCTAGTG
ATCTTCACTGGAGAGTGTGTTATGAAGATAATCGCGTACGGTTTCGTCATGCACCCGGGG
TCCTACCTGCGGAACGGCTGGAACTTGTTGGATTTTACCATCGTTGTTATCGGGCATTAC
CGTCCCGTACATATTTCGGACACGCTGTTAGAGGTCTGCTTACGCGTGTGTTTCGAGTGC
CGCGCGCTGTTGCGGCGTTATCACAAGTTTAAGAAACAAGTACAATGTTGCTACACGTCG
TTACTGAAGCAAATAAAACAGGATACCCCCTCGGAGAAAATATCAAACGTGCCCCATTTG
AAATCTGAGCCGATACACAACTTGAGCTATCCCGATGACATCGTGAAGGTGGAGTTCGAG
GATGTGGACGTGAAGAATGAGGTCTCCGACAGGGAAGAGCTCCACTATGAGCCGGAGACG
TTTGTTAAGGACCTGCAGCTGGCCAAGAAAGAGGCCAAGGACAAAAAGACGACGAAAAAG
AAAACAAAACAGAAGATTAAATTGAAAACGAAGAACATGCAGGCGGGTGAGAGCGAAGTC
GACGCGGATGTAAAGACGAGGGCGGACCTCTTCAGCTGCCAGGACTGTGGGAGGAACTTT
GATGAGAAGCTGGACTTGGAGAAGCATATCATAGCGGACCATACGCTGAAGAAGGAGGTG
AAGAATAACGGTGTGAAGGAAACCCTGCCGGAGAGACCGCAGTGCGTTGAGTGTGGAAAG
GTTTTCAGTTCCCGGAAAACGTATAGATATCATCTGAACGTTCTCCACAAGGGCCAGAAC
AGGTATCCTTGTCCCAGATGCGGCAAGGTGTACCAGTGGAAGTCTAACCTGGGCAGGCAT
TTGAGGAGTCACAAGCGGTCACACGATCCGCCCTCCACAGCATACAGTGGCGCCCCCTGG
TTTGTCATAGAGGACTCTAGATGCATGTTTCTGTGTAAGTGTGACTATCTCCTGACGGTT
CCGTACCCACAGGCCCGGGACAGCGGCGAGTTACATTGTCACACCTGCGACAAGAGGTTC
GCGTCCGTGGCCACCTACAGGCAGCACCTGCGCGTCTCTCGCTCACACGTCTCGGAGACT
GACTTCACAGACACTCAGAGAGATAGAGAGACACACAGAGACACTCAGAGAGATACAGAG
ATATACAAACACACATGCACAGAGACACACAGAGAGATAGAGAGACACACAGACGCACAC
ACACACAGAGACACTCAGAGAGAAAGAGATACATACAGACACACATGCACAGAAACACAC
AGAGAGATAGAGAGACACACAGAGACAAACAACACAAATTTAAAAAAAATCATGTCACGT
CTTACGAGATTCACCTTGCCATTTCCCTCTCACGCTGAGCGAAGCGACCTCGGCGTGTCT
GCACCGGGTCATGTCTCCAGACACGGGTTCCGTGTCCGGGCAGGGATTAATATGTCACTG
ATAGAACATACCCATCTTAAAGAAAACGAACGAAAAGGCGACTCTACCAGACATTCGGTC
GCCGAGCTCATCTCCGCGGATGAATTCATGTGCAACGAGTGCGGTAAGAAATTCGTCAAC
AAAACCAGGCTGAGAGACCACATCGACTGGGAGCACCTCAATAAAATTAAGTTCAAATGC
AGCCTCTGCAATAAGTCCAAGTCACTCCTTGTTATATACGAAAGTGTCATCAAAACCGGT
CCAGCCGCTGAGATATCGCTTCCAACAGACACGTACACAAGGATAGCGATTACATCATTT
AGTTGTGATCTGTTCTTCATATATAACCGTTCCTCGCTCCCCGTGCGGCCGGCGCCTTAT
CGTGTGTTGATGTTGCATGTTTCAGCCGTTCAAGTGCCACACGTCCTTGTACGTCCACAT
GCAGAACGTGCACAGGAACAAGGAGAAGAAAGACAACCTGTGTCACGTCTGCGGGAAATC
ATACCAGACACAAGTCACGTCGACAAAATACTTTCCCGCGTAAAAGCCAGCAAACCAGAT
GTCATCGCCGTGACGTCACTTCGGAACGCCGCCAAGCTGCGCTACCACATCGTGGCCATG
CACACGAGCGAGACGCCCTACAGCTGCGGCCAGTGCGGCGCGGCCTTCGGCTGGTACTCC
TCGCTGTACCGACACATGCGCGAGGTGCACCACAAGATGAAAGTTCAGCCGAAGAAATCT
AAGAAGTTGAAGAAATCCAGCGAGCTGGTGTCATCCTCACACGCGCATCAGGCCGGACCC
GCTTAG
Protein sequence:
MILTTIFANCIALAVYTPYPASDSNYTNWVLEKIEYIFLVIFTGECVMKIIAYGFVMHPG
SYLRNGWNLLDFTIVVIGHYRPVHISDTLLEVCLRVCFECRALLRRYHKFKKQVQCCYTS
LLKQIKQDTPSEKISNVPHLKSEPIHNLSYPDDIVKVEFEDVDVKNEVSDREELHYEPET
FVKDLQLAKKEAKDKKTTKKKTKQKIKLKTKNMQAGESEVDADVKTRADLFSCQDCGRNF
DEKLDLEKHIIADHTLKKEVKNNGVKETLPERPQCVECGKVFSSRKTYRYHLNVLHKGQN
RYPCPRCGKVYQWKSNLGRHLRSHKRSHDPPSTAYSGAPWFVIEDSRCMFLCKCDYLLTV
PYPQARDSGELHCHTCDKRFASVATYRQHLRVSRSHVSETDFTDTQRDRETHRDTQRDTE
IYKHTCTETHREIERHTDAHTHRDTQRERDTYRHTCTETHREIERHTETNNTNLKKIMSR
LTRFTLPFPSHAERSDLGVSAPGHVSRHGFRVRAGINMSLIEHTHLKENERKGDSTRHSV
AELISADEFMCNECGKKFVNKTRLRDHIDWEHLNKIKFKCSLCNKSKSLLVIYESVIKTG
PAAEISLPTDTYTRIAITSFSCDLFFIYNRSSLPVRPAPYRVLMLHVSAVQVPHVLVRPH
AERAQEQGEERQPVSRLREIIPDTSHVDKILSRVKASKPDVIAVTSLRNAAKLRYHIVAM
HTSETPYSCGQCGAAFGWYSSLYRHMREVHHKMKVQPKKSKKLKKSSELVSSSHAHQAGP
A