| New model in OGS2.0 | DPOGS213513 |
|---|---|
| Genomic Position | scaffold271:+ 9727-15006 |
| See gene structure | |
| CDS Length | 2091 |
| Paired RNAseq reads | 1024 |
| Single RNAseq reads | 2362 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011794 (5e-116) |
| Best Drosophila hit | CG5018 (8e-79) |
| Best Human hit | cirhin (4e-62) |
| Best NR hit (blastp) | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (7e-128) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (2e-125) |
| GeneOntology terms | GO:0008150 biological_process GO:0003674 molecular_function GO:0005575 cellular_component |
| InterPro families | IPR015943 WD40/YVTN repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019775 WD40 repeat, conserved site IPR011046 WD40 repeat-like-containing domain IPR001680 WD40 repeat IPR019781 WD40 repeat, subgroup |
| Orthology group | MCL13323 |
Nucleotide sequence:
ATGCCTTGTAAGCTTCATCGAGTGAGATATTATAATCCAAAACCGGTACAAATAAATTGT
GTCTCATTTAATAAAAGCAGTAAAAGAATCGCATTGGCTAGACAGGACGCGTCTATAGAA
ATATGGGATTTAAATTTTGCACCTCTCCTTGTGCAATGCATTTCTGGCACGGAAGATACT
TCGGTGGAAGCTCTGGGTTGGGTGCACGACAGGCTTTTATCAACAGGCCTTGGCGGTGCT
CTTATAGAATGGGATCTTGAAAGTCTGACGATAAAATTTTCAGTAATGCTCACGGGTTAC
GCTGCGTGGTGTCTTGATGTTAACTCGGCAAACACTGTGGTAGCTGTTGGAACAGAGCAA
GGCTACATCAACTTATACTCTGTAGAAAATAATGAAATTGTTTATAAAAAACTCTTTGAT
AAACAGGAAGGCAGGATTATGTGTTGTAAATTTGATAAAACCGGCAACACTCTGGTTACA
GGCTCGGTGGACACCATAAGAGTTTGGAATGTAGAGATGGGATATGCAACTTGCAGGATT
TCTGTTAACAGAAGGGGGAAAGAGACTATAGTGTGGTCATTAGCCGTACTGTCTGATAAC
ACAGTTGTGTCCGGTGATAGTCATGGAAGACTTACATTCTGGGATGGCAATCTCGGAGAT
CAGATTGAATCCTACACAACCCACAAGGCTGACATTCTATCCATTGTTGTGTCTGATGAT
GAGAGGAGTCTATACTGCAGTGGAGTAGATCCGGTCATAACCAACTTTGTCAAAGTCAAT
AACAGCGCGGGCAAACAGACATGTGCTCGCTGGGTGAAAAATGTTCAGAGGAATATTCAC
GAACACGATGTAAGAGCCCTTGTTCTGAATGGAGAAAAATTATTATCAGTTGGAGCGGAT
GGATATTTGACGCTGTCAAGTTACCCGCCAAAGTGGGTGATGCGAATCCCACCCATGATA
CCAGCACCGAGATCGTGCGTCAGCGCTCGCAACAAGTTACTACTACTTAGATACAGCAAT
TACCTTGAAATATGGAAATTGGGCTCGTATGCCATCAACAAGAATGGGAATGTCACAGTG
AATAGTGTCAACGTGGAGCCGAGTGTCAACTCAGGCAGCAACCAGTTGGAGCAAGATTCA
CAGTTCATCAGTCAAGTAGGAAAACACACTCAGAAACAGAGCTTGAAGCTGATAGAGCAG
CCGACGCGCCTGGTCTGTATACAGACTAAGGGAAAAAAACAGATAAGATGGTGTGAGATG
TCACCCAGTGGGGAATTGGTTGTGTATTCAACGGACAGCGATTTGAGAATGCTGAAGTTG
GATTGTGACGATGATCAAAGTAACGTATCCCTCACCAAAGTATTCATAAACGGCATATCA
CACTGTGATCGTGTTGCCTTCACCGCTGACTCGAGGACGTTGGTGGCATACGGAGATGGG
ACAGTGTTCATACTGCAGGTTGACCCGGAATCTGGTGCCACGGTGGTGCAGACCTTACCA
TGCGACCAATATCTTAAGATGAAGTCTATTCTGCACCTTGTTGTATCGAAGGATGTTTCC
AGACATATATATGTGGTCGTATCGGATACTCAGGGGAACATAGCTGTGTTTGTGAAGAAC
TATCTCAAGTTTGAGTTCCACGCTTCATTACCTAGATACCATTGTTTGCCATCGGCTATG
TCAATTGCTGGAAAGACTCTCATCATTGCTTATGTGGATCAGAAGATAATACAGTACGAT
CTGTCTCGTAAAAAACTAAGCAAGACAAATTTCTATGACGTTCCAAGTTTGAGCAAGAGG
ACTTGGGCTATAACTGGAGTGACGTCACATCCCGTGAGACCAGCAACAATCTTTTATGAT
GAGACTTCATTATCGGTCATGGAGAAAACCTTGGAGAATGGATCCTACGAACCAGCGCCA
AAGATGAAGAACAAAAACGATAACAAGTACCACGGATTAAAAATTATTCCCTTCAAGTAT
TTGGTTGGATTCCACTGGCTGGGTGACGACGAGGCTGTATCGTTGGAAGTCTTACCCGAG
AATATTATATCACAGCTACCGCCGGTGTTGGCTATGAAAAGACATTCATGA
Protein sequence:
MPCKLHRVRYYNPKPVQINCVSFNKSSKRIALARQDASIEIWDLNFAPLLVQCISGTEDT
SVEALGWVHDRLLSTGLGGALIEWDLESLTIKFSVMLTGYAAWCLDVNSANTVVAVGTEQ
GYINLYSVENNEIVYKKLFDKQEGRIMCCKFDKTGNTLVTGSVDTIRVWNVEMGYATCRI
SVNRRGKETIVWSLAVLSDNTVVSGDSHGRLTFWDGNLGDQIESYTTHKADILSIVVSDD
ERSLYCSGVDPVITNFVKVNNSAGKQTCARWVKNVQRNIHEHDVRALVLNGEKLLSVGAD
GYLTLSSYPPKWVMRIPPMIPAPRSCVSARNKLLLLRYSNYLEIWKLGSYAINKNGNVTV
NSVNVEPSVNSGSNQLEQDSQFISQVGKHTQKQSLKLIEQPTRLVCIQTKGKKQIRWCEM
SPSGELVVYSTDSDLRMLKLDCDDDQSNVSLTKVFINGISHCDRVAFTADSRTLVAYGDG
TVFILQVDPESGATVVQTLPCDQYLKMKSILHLVVSKDVSRHIYVVVSDTQGNIAVFVKN
YLKFEFHASLPRYHCLPSAMSIAGKTLIIAYVDQKIIQYDLSRKKLSKTNFYDVPSLSKR
TWAITGVTSHPVRPATIFYDETSLSVMEKTLENGSYEPAPKMKNKNDNKYHGLKIIPFKY
LVGFHWLGDDEAVSLEVLPENIISQLPPVLAMKRHS