| New model in OGS2.0 | DPOGS207537 |
|---|---|
| Genomic Position | scaffold355:- 61758-63686 |
| See gene structure | |
| CDS Length | 462 |
| Paired RNAseq reads | 1 |
| Single RNAseq reads | 5 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013942 (7e-30) |
| Best Drosophila hit | retinal homeobox (2e-13) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to Retinal homeobox protein Rx (DRx1) (DRx) [Tribolium castaneum] (3e-37) |
| Best NR hit (blastx) | PREDICTED: similar to Retinal homeobox protein Rx (DRx1) (DRx) [Tribolium castaneum] (3e-23) |
| GeneOntology terms | GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0005634 nucleus GO:0003704 specific RNA polymerase II transcription factor activity GO:0007420 brain development GO:0043565 sequence-specific DNA binding GO:0007275 multicellular organismal development GO:0003700 sequence-specific DNA binding transcription factor activity |
| InterPro families | IPR003654 Paired-like homeodomain protein, OAR IPR001356 Homeobox IPR012287 Homeodomain-related |
| Orthology group | MCL11031 |
Nucleotide sequence:
ATGATGCAGACATGGTGTCATGGTTGGAAGCAGGAAGTAGCTCCGAGGGTCACCATCAGT
CTTCCCCGTCGAAGCCTCGACCCCGACTCCCCTACATGCGTCTGGTTTCAAAACCGTCGT
GCCAAGTGGCGTCGTCAGGAGAAGATGGAAGCGGCTCGTCTGGGTCTGTCGGAGTATGGG
GCGCCGGTCCCAAGACTCTCGGGGCTCGGTCTGCCCGTGGACCCCTGGCTCGCTCCACCG
CTACTCACAGCACTACCTGGTTTCCTGAGTCACCCCCCGTCAGGTTACCCCTCGTACCTC
ACACCCCCCGCTCCACCTCCTCATACCCCTCACCCCCCACACACCCCACACACCAATCAT
CCCCCCACACCCTCGGACCCACGCTCGTCTTCCATCGCCGCTCTTCGACTGAAGGCCAAA
GAGCACGTGGAGAGCATCAGTAAGGGGCTGACGATGGTGTAG
Protein sequence:
MMQTWCHGWKQEVAPRVTISLPRRSLDPDSPTCVWFQNRRAKWRRQEKMEAARLGLSEYG
APVPRLSGLGLPVDPWLAPPLLTALPGFLSHPPSGYPSYLTPPAPPPHTPHPPHTPHTNH
PPTPSDPRSSSIAALRLKAKEHVESISKGLTMV