| New model in OGS2.0 | DPOGS202730 |
|---|---|
| Genomic Position | scaffold485:- 38036-43688 |
| See gene structure | |
| CDS Length | 2037 |
| Paired RNAseq reads | 686 |
| Single RNAseq reads | 1951 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005454 (0.0) |
| Best Drosophila hit | another B-box affiliate, isoform A (9e-07) |
| Best Human hit | tripartite motif-containing protein 2 isoform 2 (6e-28) |
| Best NR hit (blastp) | tripartite motif-containing 2 protein-like [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | tripartite motif-containing 2 protein-like [Nasonia vitripennis] (1e-178) |
| GeneOntology terms | GO:0005622 intracellular GO:0008270 zinc ion binding GO:0005515 protein binding |
| InterPro families | IPR014756 Immunoglobulin E-set IPR001841 Zinc finger, RING-type IPR000315 Zinc finger, B-box IPR017868 Filamin/ABP280 repeat-like IPR013017 NHL repeat, subgroup IPR017907 Zinc finger, RING-type, conserved site IPR018957 Zinc finger, C3HC4 RING-type IPR001298 Filamin/ABP280 repeat IPR013083 Zinc finger, RING/FYVE/PHD-type IPR013783 Immunoglobulin-like fold IPR011042 Six-bladed beta-propeller, TolB-like |
| Orthology group | MCL15955 |
Nucleotide sequence:
ATGGCGAGCATGAGTTCCACGCTCGTCGAGACGGTGTCCATCAACTATGAGGATTTTAAC
GAAAGCTTCCTCACATGCGGCACCTGTTTATGCACTTACGACGGAGGTGAGCATACTCCA
AAATTACTGCCATGTTCGCACACCGTCTGTCTGCATTGTCTCACCCGAATAGCAGCCTCA
CAGACAAGAGACGCGGGTAGTTTTAGGTGTCCTATATGCCGCGAACTAATAACGATACCA
CGTGGCGGAGTACCCGCACTACCTCCATCGTTCCTCGTCAACCAGTTGCTAGATTTGATG
GCGAGACAGAGAAGGGAAGTCATACCCCAGTGCAGTTCCCACCCCGGTAGGGAGCTACTA
TTCTGTGAAACCTGTGATTGCGTATTTTGCAGACATTGTGCTGACGGACCTCACAGCGAT
ACGCCCTGCGATCATACAGTCGTACCGTTTTCTATAGCATTGAAGAGAATGTCCGAAATA
TTATTATATAGAGCCAACGAGTGCCTCAGTAAGCTCGGCTCGGCCAGAGAAGCTGTAGCG
AGTGAGTTAAGAAGATTAGAGGCGGCTGCGACCGCGGCTGACGAAGCCATAGATAGACAT
TTTACTGAGTTGAAAGCTGCCTTAGACAAACGTCACAACGAGCTTAAATCAGCGGCCGCT
GCTGCCGCGACGCATAAGAGGAAGCTGCTCGAAGAACAGTTAAAGTTGATCGACGCCGAG
AAAGCTAAAGTGGAAGCAGAATGTTCTGGTCTTCAGCAGCAAGTGGAGGTTAGAGAAGTG
AGCAGCCGAGCTGCCGCTTTGGGAGCGAGATTAGGAGACGCATCCGCACTGGCTGAGCCG
AGAGAGAACGCGTTTTTAGCTGTCGACTTCGCGCATAACGACGCCCAGCAGAGATTTGCT
GAAGCTTTGGCGGAACTGGGAAGGGTTCGGACGAGTACAACCTTCCCTGGCCTATGCACT
CTTCAGTTAGAATCCCCGTGTGTATGCGGTCTGGAGATGGTGGTGGTTCTTCGTACAGTG
GATTACCACGGCGAGGCTCGCAGTACTGGCGGGGATCCGGTCACAGCTGCCGCTACCCTC
GACGACTCACCTCTACCGTGCACAGTTACTGATCTTGATACTGGCTTGTATCGGATCTCA
ATGCGCCCATGGAGTCCGGGGGCGGTGTGTGTCCGTGTGTTGGTGTTCTCGCGGGGTGTG
AGAGACTCCCCGCTACGTGCGACCGTCGCCACACACGCCGCACCCCTCACAGTGTGGGGG
GCGCGCGGCTCAGGGAAGGAACAACTCAATCAGCCCGTTGCATTGGCTAGATGTTCAAAA
CGTCGGGAGATCTACGTTCTAGACGCCGGTAATTCAAGAGTGAAGGTTCTGGATGACGAG
ACGTTCGCTTTTAAAACACACATCGTTAATGACGGTCTTGCGGGGAGGAGTTGTACTGGT
ATTGCGGTGACTGCTGAGGGATTGGTTGTTGTCAATTGGCGGACGAAGACTCTCACAGAG
ATGAACGCTGAAGGCGAGACTCTCCGTACTATACGGTCAGATCGTCTAGTGGAGCCTGTA
TGTGTGGCCGCACACGCTCCCAGCCGCCGTCTGGCCGTCGCTGATAACGGAGCGCGGACC
GTCTTCCTGTTTGATATACATGGGAACATAGAACGAGAGATAGGTAACGGTGACCTGGGT
CTCGTTGGTGGCCTCGCCCTCACCGAGGACATGTTGGTGATAGCGGACGTGGCTGTTCGA
GTGTACGACGTTGACGGTAACCTGCAGACAACGCTCGCGCCAATACCTAAAGGTCGCGGG
GGATACGGCGGTATAGCTGTGGAGGAGACAGACAGCGGCTGGCATATAGTGTGCGCTCGC
TCGGTCAAGGGTCGGCCGGCGCTGGTGGTGCTGGACTCGGGGGGCAGGCTGCTCGCCGCC
TGCGACCTCGCCGACAGACGACCTCGTCGGGTCGCGGGCGTCGCCCTACTGCCAGAGAGA
AGAGCGCTCCTCGCAGACCTAGCCGGGGACTGTCTCCGGCTTCACACGTACTGGTGA
Protein sequence:
MASMSSTLVETVSINYEDFNESFLTCGTCLCTYDGGEHTPKLLPCSHTVCLHCLTRIAAS
QTRDAGSFRCPICRELITIPRGGVPALPPSFLVNQLLDLMARQRREVIPQCSSHPGRELL
FCETCDCVFCRHCADGPHSDTPCDHTVVPFSIALKRMSEILLYRANECLSKLGSAREAVA
SELRRLEAAATAADEAIDRHFTELKAALDKRHNELKSAAAAAATHKRKLLEEQLKLIDAE
KAKVEAECSGLQQQVEVREVSSRAAALGARLGDASALAEPRENAFLAVDFAHNDAQQRFA
EALAELGRVRTSTTFPGLCTLQLESPCVCGLEMVVVLRTVDYHGEARSTGGDPVTAAATL
DDSPLPCTVTDLDTGLYRISMRPWSPGAVCVRVLVFSRGVRDSPLRATVATHAAPLTVWG
ARGSGKEQLNQPVALARCSKRREIYVLDAGNSRVKVLDDETFAFKTHIVNDGLAGRSCTG
IAVTAEGLVVVNWRTKTLTEMNAEGETLRTIRSDRLVEPVCVAAHAPSRRLAVADNGART
VFLFDIHGNIEREIGNGDLGLVGGLALTEDMLVIADVAVRVYDVDGNLQTTLAPIPKGRG
GYGGIAVEETDSGWHIVCARSVKGRPALVVLDSGGRLLAACDLADRRPRRVAGVALLPER
RALLADLAGDCLRLHTYW