| New model in OGS2.0 | DPOGS201014 |
|---|---|
| Genomic Position | scaffold155:+ 9250-21018 |
| See gene structure | |
| CDS Length | 1968 |
| Paired RNAseq reads | 167 |
| Single RNAseq reads | 496 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009102 (1e-94) |
| Best Drosophila hit | CG13868, isoform B (2e-59) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to GA12584-PA [Nasonia vitripennis] (1e-71) |
| Best NR hit (blastx) | PREDICTED: similar to GA12584-PA [Nasonia vitripennis] (2e-67) |
| GeneOntology terms | GO:0006278 RNA-dependent DNA replication GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL15517 |
Nucleotide sequence:
ATGTTCAGCAGTCAATTTCAAATAACTTCTCCCTCGGGCCCTGCGTCACCAATGAATGAT
GCTGAGACCATTACGGCCACACCTTTGAGTTTTTCTGCTGCTCAGGTAGCAGAGACTATT
AAAAGAATAAACAGAGGTAAGTCGCCTGGTCATGATGGTCTCAGCATTGAACATCTAAGA
CATGCGGGGGTTTATCTACGTAGAGTATTGGCGATGTTTTACTCCTTGAGTTTAAAACAT
TCTTACCTTCCAGCAGATATGATGAGAACGGTGGTGATCCCTCTAGTTAAAAATAAAACT
GGAGATGTTTCTGATCAGTCTAATTATAGGCCCATATCACTAGCCACGGTACTTGCTAAG
GGTGAAACAATGTCAGACTCGTATCGATTGGAATTCGGAGTGAGGCAGGGGGGTATAACC
TCGCCTAAGCTGTTCAACCTTTACGTAAACGAACTACTCGTGGGACTCAGCAGCAAGCCA
GTTGGATGCTGGATAGACGCTGTGTGTGTTAATAACCTTAGTTACGCAGACGACATGGTT
CTGCTGGGTCCTACGGCTGGTTCTATTAGGTGTCTCTTAAAGACGTGTGAGAAATATGCA
TTAAAACATGGCCTTACGTACAATGTCAATAAAAGTGAATACATGGTCTTTGGGATCCGT
GGAAGGGTAATCGACTACAAACCGGTTTTAAAACTAAATGAGAAACAGTTAAGTCAGGTT
AAAGTATTTAAATATCTTGGTCATTACATTTCCGAGGATCTCAGAGACCATGCAGATATT
GAACATGAACGAAGGGGACTTGCCGCCAAATGTAATATGCTTGCCCACAGGTTTGCTCTA
TGTAGTAAAGAGGAGGACCTCTCGGAGGTCCAGCACCTGACCGGCCCTTTGCCCCGCCCC
AGGTGGGCGCATCCTCAACCCCCCGTACACCTGACGAGTCACACACACGAGGCACTCGTT
ACCAAGACCGAGGCCATCCTCAGGAGCCTACTGGTCGCCAACAACTATGACTCCGTCAGC
AACTTCCTGGCCATGCACGACGCGTACGAGAAGACCGAGTCCGAGAGGACCCTGTACGAC
ATGTTCTTGGAGTACTCGCCCCAGGTGATCCGCGGCCGGTTCACGTGTGTAGGCCTGGGA
TTCGAGCTGATACAAAAGTGGAGAGCGCTGGATAAGGAGTTCCCGGGATTCGCGAACGCG
ACGGGCTTGTTCTCGTGCGAGGAGGCCGTGGTGGACGTGTTGGATTACGTTGGGTCGGGG
GAGACCCCGGAGTCCGTGCTGCAGGCGGAGAAGGAGCACGTCATGGTGGGCGCTCACGTG
TTTATAGACGGACGGCCCGGGGTCATCCTGGCCGACCCGGGGTATCACGTGGCCAGGATA
GTCACTGTCATGAGCGATCGGGCCTACCCACATACAGGCTGGTTCATACAGTCCGAGGAG
CCATGCCTCAAGGAGTACGAGTACAGCTACAGTCCTCACAACACCAACTACGTGGAGTGG
CACGAGCGGGTCACGCGGGGGTCAGAGGTCAAGCTGCAGACGTCCCTGGTGTTCGTGGCC
CAGCCCTTCCTCGACAGTATCGATGTCACAGAGAAACGGAACCTCGTTTATAACTTCCGG
AGTCTTCTGTCTCGTGACTCCAAGGGCGAGCTGACCGCGGGTCTTTACTTCCCGGTCGGT
GCGCGGTTCAAGGACGCTACCTTCACCCTGTTCCTGGCTGACGGCGGCGAGAGACGGAAA
ACGAAGTACAAATTTAGCGCCTTCACGGATGGGTTATCTCAATCAATTGTACAATTCCTC
ATAACACAATCTATGTTAGAAGACATCGAGAAATGCAGCGTCAGGATGAGGTACAAGAAG
CGGGAACTCCTCAAGATTATCATTAAAATAGCCAGGGTTTTGTCCAATCAATCGTTCATC
GATCAAGTGCTGGAAATCAACGACGAGATATGCAGACTGTCGTTATGA
Protein sequence:
MFSSQFQITSPSGPASPMNDAETITATPLSFSAAQVAETIKRINRGKSPGHDGLSIEHLR
HAGVYLRRVLAMFYSLSLKHSYLPADMMRTVVIPLVKNKTGDVSDQSNYRPISLATVLAK
GETMSDSYRLEFGVRQGGITSPKLFNLYVNELLVGLSSKPVGCWIDAVCVNNLSYADDMV
LLGPTAGSIRCLLKTCEKYALKHGLTYNVNKSEYMVFGIRGRVIDYKPVLKLNEKQLSQV
KVFKYLGHYISEDLRDHADIEHERRGLAAKCNMLAHRFALCSKEEDLSEVQHLTGPLPRP
RWAHPQPPVHLTSHTHEALVTKTEAILRSLLVANNYDSVSNFLAMHDAYEKTESERTLYD
MFLEYSPQVIRGRFTCVGLGFELIQKWRALDKEFPGFANATGLFSCEEAVVDVLDYVGSG
ETPESVLQAEKEHVMVGAHVFIDGRPGVILADPGYHVARIVTVMSDRAYPHTGWFIQSEE
PCLKEYEYSYSPHNTNYVEWHERVTRGSEVKLQTSLVFVAQPFLDSIDVTEKRNLVYNFR
SLLSRDSKGELTAGLYFPVGARFKDATFTLFLADGGERRKTKYKFSAFTDGLSQSIVQFL
ITQSMLEDIEKCSVRMRYKKRELLKIIIKIARVLSNQSFIDQVLEINDEICRLSL