| New model in OGS2.0 | DPOGS202878 |
|---|---|
| Genomic Position | scaffold273:- 225628-227394 |
| See gene structure | |
| CDS Length | 1599 |
| Paired RNAseq reads | 732 |
| Single RNAseq reads | 2054 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004201 (0.0) |
| Best Drosophila hit | Grip71 (8e-16) |
| Best Human hit | protein NEDD1 isoform a (5e-19) |
| Best NR hit (blastp) | PREDICTED: similar to neural precursor cell expressed, developmentally down-regulated 1 [Tribolium castaneum] (3e-39) |
| Best NR hit (blastx) | PREDICTED: similar to neural precursor cell expressed, developmentally down-regulated 1 [Tribolium castaneum] (8e-39) |
| GeneOntology terms | GO:0000922 spindle pole GO:0005814 centriole GO:0005737 cytoplasm GO:0005932 microtubule basal body GO:0000242 pericentriolar material GO:0045177 apical part of cell |
| InterPro families | IPR011046 WD40 repeat-like-containing domain IPR017986 WD40-repeat-containing domain IPR001680 WD40 repeat IPR015943 WD40/YVTN repeat-like-containing domain |
| Orthology group | MCL18884 |
Nucleotide sequence:
ATGTATCTTTCCTCTGTTAGTTCACGGTTATTGCTTTACGACACTAATAATTGGGAGCTG
AAAAAATCTTACGGTTGTTATGATGGCGTTCTGAGAGACGTGTCGTGGAGTGATGATAGT
AAATATATCTTACAGGTAAATGCTGCAGGGCTGATTGAAGTTCTAAGTGCAGTGGACCAT
GATGTGAGAAGCCTACAGCATGTTCCATTAAAAGGCACCTGGTCGGGGAGCTTCCACAGA
GATGGACACAGAAATATAGCCGTTGGCACTACCAGTGGAAATGTAAAGATTTGGGACACA
AAAAACAAAACTATTACAAAAACATTCCCAGCACCCACACATCCATCGTGTGTGCATCTA
ATAAGCTATAATGCCAAAAACACAAGTCTAGCTGCAAGTATGATAAATGGAGAAACAGTT
ATTTATGGCCTCGTCTCTAACATTCCAGTTCTAACTGTTAAATTAAACTGCTCCAAAAGT
ATATCAGCCATGAAGTTCCATCATGAGTCCAGATCCCTACTTGGCTTGGCCACAGATGAG
GGCCATGTTATTCTCAGAGACATTACAACTAATAAAGACAGAGCATTCTTTGAGAATATT
CACGCCTCACCAGTCAGCGACTTTGCATTCTCTCTAATTAATAAAGATGTCCTGCTCTCA
TCTGGTTATGACAAAATTTTACATGTTTATGACATAAGATTACAAAATGTAGTTTCAACA
GTTAGAACGTCACATACATTGACATCTTTAGCTATAAATATTGAAAATCAGGTAGCACTT
GGAACAAAAAGTGGAAATATACTAGCATACGACTTAAGAGATTTGACAAGTCCATTCAAA
GTTCTTAAAGGGCATGAAGAAGAGGTTTCCAAAGTAGCCTTCCAGCCTATAAGAAAGAAA
TCATTTTCCAATGACGTTAGTCTGAGAGAGGAAGTGGAAAACACATCACCCCTAAAGACA
CAATCAGTAAGACCAAGGACATCTGATTTGTTCTTTGTCAACGACACTCCACCAAAAAAC
AATATAGACATGTCACCATGCAGTGGTGATAACAAAGCTGATTCCTTTCTTGTGATGTTA
GGACTTGACAAATCTAACATGGATTTTGATGATGACCCAAACAAGTCTATGGATATTGAG
AGAAAAAGTGACAAACATGAACTGAGGTATCGTCAATTAGATGCTGAGAAGAATATCAGC
AAAATATCAACACCCTTGACCAGCAGAGCTGCAGATTTAGGGTTTCCGTCTCCGTTATAC
ATCCCCAATGGTATGGAAGACGTTAGGGGATCCTTAAATAACCTCACAAACATAAAACAG
TGCCAAAGTAACACAGCAAATGCACAAATTGATAGCAAATCTATAGAGGAACTTAAAGAT
TTTATTAAATTGTCTCTATCGGATGTGGCAGACGAGAATCGAAATTACTTCCTACACATT
ATGATGGCTCTGACGAAACAGAAATTATATCTAGAGAAACAATTAGCCACAATGACCCAG
CAGGTGCAGAACTTGGTCCAAAACCAAAATGCTCTGGTTGAAGCAAACAGAAAGTTAGCT
CTTCAAATAGATCAAATGAAGATACAACAAAATTTTTAA
Protein sequence:
MYLSSVSSRLLLYDTNNWELKKSYGCYDGVLRDVSWSDDSKYILQVNAAGLIEVLSAVDH
DVRSLQHVPLKGTWSGSFHRDGHRNIAVGTTSGNVKIWDTKNKTITKTFPAPTHPSCVHL
ISYNAKNTSLAASMINGETVIYGLVSNIPVLTVKLNCSKSISAMKFHHESRSLLGLATDE
GHVILRDITTNKDRAFFENIHASPVSDFAFSLINKDVLLSSGYDKILHVYDIRLQNVVST
VRTSHTLTSLAINIENQVALGTKSGNILAYDLRDLTSPFKVLKGHEEEVSKVAFQPIRKK
SFSNDVSLREEVENTSPLKTQSVRPRTSDLFFVNDTPPKNNIDMSPCSGDNKADSFLVML
GLDKSNMDFDDDPNKSMDIERKSDKHELRYRQLDAEKNISKISTPLTSRAADLGFPSPLY
IPNGMEDVRGSLNNLTNIKQCQSNTANAQIDSKSIEELKDFIKLSLSDVADENRNYFLHI
MMALTKQKLYLEKQLATMTQQVQNLVQNQNALVEANRKLALQIDQMKIQQNF