| New model in OGS2.0 | DPOGS212327 |
|---|---|
| Genomic Position | scaffold219:- 62172-73324 |
| See gene structure | |
| CDS Length | 1062 |
| Paired RNAseq reads | 422 |
| Single RNAseq reads | 1156 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012007 (5e-103) |
| Best Drosophila hit | CG11658, isoform B (3e-89) |
| Best Human hit | F-box only protein 32 isoform 1 (1e-32) |
| Best NR hit (blastp) | AGAP012127-PA [Anopheles gambiae str. PEST] (9e-124) |
| Best NR hit (blastx) | AGAP012127-PA [Anopheles gambiae str. PEST] (1e-106) |
| GeneOntology terms | GO:0004842 ubiquitin-protein ligase activity GO:0006511 ubiquitin-dependent protein catabolic process GO:0016567 protein ubiquitination GO:0019005 SCF ubiquitin ligase complex |
| InterPro families | IPR022364 F-box domain, Skp2-like |
| Orthology group | MCL12704 |
Nucleotide sequence:
ATGCCTTTTATATCAAAGGACTGGCGTTCCCCCGGCGAGGTGTGGGTTAAGACTCAGGAA
GGCTGGGAAAAGAAGAAAGTCCTCGAGTGCACGGCCCAGAGATATGCAGCTATCTCTAAC
TATAGTAACAAAGATAATCAGCAAAATTGGAACAGTGAAGATGGAGAGAATAAAACTGAT
GAGGTGGCCCGTGTTCCACCGCACTGTCACATTACGATAAAATGTACTAGAGAGATCGCT
GGTTTCAACGGTCTGTCAGAGGCTGTGCGTAGATTGGACTTCTCGTCGGCCGTGCGTGAC
GTCAGACGATTCAACTACATCTGCGCACTCCTGGAACTGCTGCTGGGTGGCCAGAAGTTG
ACCAATTTGCCAGGAGCAGCCCAGAAATTGTTACTGTCGATGCTGGAGCAGCTCGCTGTC
CAAGTGGCGCGGTCCAAGCAAAATCTTAACGCGCTGCGAGCGCTCCTGACTGCGCTGGCA
GCGCTAAGGGAGGCTGAGCGGAGAGCTTGTTGGGGCAGACCGCTGGGTTCCCGCGCGCTG
TGGGGTCACCACAGACACGCCATCGACCGTATCTATCACATCGCTGACGGCATTGCCATA
CAAGAGCCGGGACCAGAAGTAGTTCCTAAGCTTCACGATTTGCCGGAGGAGTGCATCCGG
GAGATATTGTTGAGAATATCTGATCACAGGGACTTAGAGGCTGCATCATCAGCGTGGCCA
GTGATGGCCTCGCTCTGTTCCGAACAGCAGTTATGGCGGGAGCTCGTCAACTTCCACTTC
ACCCAACAACAGATCGACTCGCTCAATAAGGACGAGAAGAATATCGACTGGAACAAAGTC
TTTCATCAGCTCCGAAAGTTGTATGGACTGAGAGAAGACGCCCAGTACGCAGAGACATTG
TCTCTATGCAGACACTGCAAGTGTCTGTTTTGGCGGTCCTTGGGACATCCTTGTATTGCC
GACCAGTGCCCTGAATACCGCGAACGTGTCCGCGAGGCCGGCGGACCTCTCCCCCCACAC
CCGGTGCCTCCAGCGGCATTCCTCAAGTTTTTCTCTCTATAA
Protein sequence:
MPFISKDWRSPGEVWVKTQEGWEKKKVLECTAQRYAAISNYSNKDNQQNWNSEDGENKTD
EVARVPPHCHITIKCTREIAGFNGLSEAVRRLDFSSAVRDVRRFNYICALLELLLGGQKL
TNLPGAAQKLLLSMLEQLAVQVARSKQNLNALRALLTALAALREAERRACWGRPLGSRAL
WGHHRHAIDRIYHIADGIAIQEPGPEVVPKLHDLPEECIREILLRISDHRDLEAASSAWP
VMASLCSEQQLWRELVNFHFTQQQIDSLNKDEKNIDWNKVFHQLRKLYGLREDAQYAETL
SLCRHCKCLFWRSLGHPCIADQCPEYRERVREAGGPLPPHPVPPAAFLKFFSL