| New model in OGS2.0 | DPOGS202233 |
|---|---|
| Genomic Position | scaffold747:- 53909-56555 |
| See gene structure | |
| CDS Length | 528 |
| Paired RNAseq reads | 258 |
| Single RNAseq reads | 1133 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013532 (4e-73) |
| Best Drosophila hit | vacuolar protein sorting 25 (3e-52) |
| Best Human hit | vacuolar protein-sorting-associated protein 25 (2e-44) |
| Best NR hit (blastp) | PREDICTED: similar to vacuolar protein sorting 25 [Apis mellifera] (3e-64) |
| Best NR hit (blastx) | PREDICTED: similar to vacuolar protein sorting 25 [Apis mellifera] (6e-67) |
| GeneOntology terms | GO:0032509 endosome transport via multivesicular body sorting pathway GO:0010669 epithelial structure maintenance GO:0045199 maintenance of epithelial cell apical/basal polarity GO:0050680 negative regulation of epithelial cell proliferation GO:0016197 endosome transport GO:0008283 cell proliferation GO:0030154 cell differentiation GO:0042981 regulation of apoptosis GO:0008593 regulation of Notch signaling pathway GO:0010797 regulation of multivesicular body size involved in endosome transport |
| InterPro families | IPR008570 ESCRT-II complex, vps25 subunit IPR014041 ESCRT-II complex, vps25 subunit, N-terminal winged helix IPR014040 ESCRT-II complex, vps25 subunit, C-terminal winged helix |
| Orthology group | MCL12135 |
Nucleotide sequence:
ATGGCAGAAGTATCTTGGCCCTGGCAGTATAACTTTCCTCCTTTTTTTACAATCCAGCCG
CATTCAGAAACAAGATCCAAACAATTACAAGCATGGCAAGAACTTATATCGGAATATTTG
AAAGTAACAAAACAATCCACCATAGATGTAAGAGAATCACAGAACAGTCCGCTGTTTAAT
AATACAGCAATCAACAGGAAGCTGTCTCCGGAGGCAGTTCTGACGGTTTTAGAGGATATG
GCGAAATCTGGTAAAGCTGCACCTATAGATAAAAGCAAGAATGTGTGGGAAGTGTACTGG
CATTCACTGGACGAGTGGGGTAACATGATATATAGCTGGGCGAGCAGTAATGGGTTAAAC
AACACCGTTTGTACATTGTATGAGCTCAGAGAGGGCGACAACACTGTTGGTGAAGAGTTC
CACGGTCTGGACATGAATGTTTTGTTAAAAGCACTGAAGGCGTTATCAAGCAACGGCAAA
TGTGAGCTGATAGAGTTTGATGACAACCAAGGAGTGAAATTCTTCTGA
Protein sequence:
MAEVSWPWQYNFPPFFTIQPHSETRSKQLQAWQELISEYLKVTKQSTIDVRESQNSPLFN
NTAINRKLSPEAVLTVLEDMAKSGKAAPIDKSKNVWEVYWHSLDEWGNMIYSWASSNGLN
NTVCTLYELREGDNTVGEEFHGLDMNVLLKALKALSSNGKCELIEFDDNQGVKFF