| New model in OGS2.0 | DPOGS204976 |
|---|---|
| Genomic Position | scaffold4298:- 1796-2479 |
| See gene structure | |
| CDS Length | 582 |
| Paired RNAseq reads | 2094 |
| Single RNAseq reads | 6253 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010145 (4e-30) |
| Best Drosophila hit | cuticular protein 92A (3e-23) |
| Best Human hit | ND |
| Best NR hit (blastp) | cuticular protein CPR71B [Papilio xuthus] (2e-54) |
| Best NR hit (blastx) | cuticular protein CPR71A [Papilio xuthus] (2e-33) |
| GeneOntology terms | GO:0008010 structural constituent of chitin-based larval cuticle GO:0005214 structural constituent of chitin-based cuticle |
| InterPro families | IPR000618 Insect cuticle protein |
| Orthology group | MCL10081 |
Nucleotide sequence:
ATGGCTTTCAAGTTGGTCGTTTTAGTTTGCGCTGTTGCTGCCGTGCAAGCTGGGGTGGTC
GCCCCCGTCGCATACTCTGCATACCCGGCGCCGGTCGCATATGCAGCTGCACCAGTCGCG
CACGCTGCTCCGATCGTTCACGCTGCCCCCGTCGCATATGCTGCTCCCGTAGCTAAAGTG
GTAGCTCCGGTCGCTAAAGTCGCCGTCGAAGAATACGACTCCCACCCACGTTACAGTTTC
GCCTACGACGTTCAAGACGGTCTTACCGGTGACTCCAAGAGTCAACAGGAATCCCGTGAC
GGTGACGTCGTACATGGATCCTACTCCGTCATCGACCCTGATGGTACTAAGCGCACTGTG
GAATACACTGCTGATGACCACAATGGTTTCAATGCTGTTGTACACAAAGAGGCTCTCGGT
GTTAAGGCTGTGGCTCCCGTTGCTAAGATCGCTGCCCCAGTAGCGTACGCTGCTGCCCCC
GTAGTACACCATGCCCCATTAGCCTATTCCGCTGCCCCAGTAGTGCACCATTCCCCTCTT
GTGCCAGCCCTAGTCCACTCCGCACCTGTCTACCACCATTAA
Protein sequence:
MAFKLVVLVCAVAAVQAGVVAPVAYSAYPAPVAYAAAPVAHAAPIVHAAPVAYAAPVAKV
VAPVAKVAVEEYDSHPRYSFAYDVQDGLTGDSKSQQESRDGDVVHGSYSVIDPDGTKRTV
EYTADDHNGFNAVVHKEALGVKAVAPVAKIAAPVAYAAAPVVHHAPLAYSAAPVVHHSPL
VPALVHSAPVYHH