| New model in OGS2.0 | DPOGS206586 |
|---|---|
| Genomic Position | scaffold4924:- 5890-17489 |
| See gene structure | |
| CDS Length | 1923 |
| Paired RNAseq reads | 626 |
| Single RNAseq reads | 2376 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013748 (5e-32) |
| Best Drosophila hit | CG33558, isoform C (9e-37) |
| Best Human hit | metastasis suppressor protein 1 (3e-37) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC008993 [Tribolium castaneum] (1e-79) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC008993 [Tribolium castaneum] (2e-74) |
| GeneOntology terms | GO:0030036 actin cytoskeleton organization GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway GO:0008093 cytoskeletal adaptor activity GO:0046847 filopodium assembly GO:0005737 cytoplasm GO:0017124 SH3 domain binding GO:0006928 cellular component movement GO:0001726 ruffle GO:0015629 actin cytoskeleton GO:0030139 endocytic vesicle GO:0007155 cell adhesion GO:0030035 microspike assembly GO:0005102 receptor binding GO:0007165 signal transduction GO:0003785 actin monomer binding |
| InterPro families | IPR013606 IRSp53/MIM homology domain (IMD) |
| Orthology group | MCL15122 |
Nucleotide sequence:
ATGTTTATGGGCGGGGGTAAAAACCTTTTGATAGATATTTTGCAGGTGTTTGATAAGATT
ATTCATATAGGAGCCACAAAGGAAATAGGAACCGCCTTGACAAGGGTCTGCCTCAGACAC
AGGGCTATAGAGACTAGAATGAAGACGTTTATCAGCACGTTGATGGAGCGTCTTATAGCT
CCACTATCGGAACGAGCTGATGAATGGCGTCGCGGTTGTAATGTTACCGGCGCATTGAGC
CGAGAACACGCACGTGAGTGTAAACGCGCCAGGGCTGAGCTGCGCAGGCGGGTCCATGAT
GCTCAGAGACACGCTAGGAAAGCGAGGCGGACGAATCCGGATGTTAAGCGGAGAGCTGAC
GTTTGTTTGCAGGATATCCAAGAACGAAAGCAGCAATTGGAGGAGATGGAAGAGAAGGCG
GTGAAGGCCGCTCTGATAGAAGAACGGAGCCGGTTCTGTAACTTCGTGTCTCTTCTCAGT
CCTGTTGTGGAGAGTGAAGTGGCAATGCTAGCAGAGGTCAGTCACCTTCAAGAGGGAACA
GAACAGTTGTCGAGGCAGATTTCGGAACCTCGGAGTTTACCCCCTGGGAGTCTACAGGTG
ATTTGCGATATAAAGTCTTGCTACAGTGGTTGGGCGGAAGGTGGCTCGGTTCCGCCCTCG
CCCTCTACATCACGACTTGGCAGTCGCAAGTCATCTTTGACATCTATATCGTCTCTTAGC
AGCCAATGCTCCGATCAACATGGTGTGTCAGGCTCAACAGTGAGCTGTTCAACTCCTATA
TCAACTGGATCGTCTATAGCACCAGCTTTGGACTCCCAGCGTGGACAGTCCACGTCTCGT
CTGGCGAGCGTCTGTAGCAGTGACTCTGGTTTTCGTTCCCAAGACACTCTCCAGCGACCC
TCTCTATACGTTGACAATGGTTCAGACAATCAAAGCATTAACAGCGAATGCGCGACACCG
TCTAAGACAAATGACGAGAATGACTCCAACGATCTCACGTCCAACTCGGCTTCAGCCACG
TGGCCAGATCTCAAAGACACGGCGCAGTTCGAGAGAGCGGCCTCCGCTATAATGGGGGGC
AGACCGCATACTATATCAGCTGGTACGGATCGCTCGTTCCAACGGCCGGCGTTGAGTGTT
CATACATTCAGCGAGAACGCCCGCGAGGGTATATACGCCAGGCCGCCTCTACCCACTGGT
TCAGACAATCAAAGCATTAACAGCGAATGCGCGACACCGTCTAAGACAAATGACGAGAAT
GACTCCAACGATCTCACGTCCAACTCGGCTTCAGCCACGTGGCCAGATCTCAAAGACACG
GCGCAGTTCGAGAGAGCGGCCTCCGCTATAATGGGGGGCAGACCGCATACTATATCAGCT
GGTACGGATCGCTCGTTCCAACGGCCGGCGTTGAGTGTTCATACATTCAGCGAGAACGCC
CGCGAGGGTATATACGCCAGGCCGCCTCTACCCACTCGCTGTTCATCGTTGGAGCGTCCC
AGTGTGCCGGCGAGGAATTCCAATTCAACAAGAGCTGAGTTCAAACCAAATAAACCTACG
AGCCTTCCGCCGCACCTCGCTAAAGAAGTACCACAAGCTTTGTACGTGAATATGTCAGAG
TTGGCGACTATGGCGGCGTCACGAGCACAGCAACAGAACAGTACGGAGTATCCTCAACAG
GAGAAGCGCTGTTCATCGTTGGAGCGTCCCAGTGTGCCGGCGAGGAATTCCAATTCAACA
AGAGCTGAGTTCAAACCAAATAAACCTACGAGCCTTCCGCCGCACCTCGCTAAAGAAGTA
CCACAAGCTTTGTACGTGAATATGTCAGAGTTGGCGACTATGGCGGCGTCACGAGCACAG
CAACAGAACAGTACGGAGTATCCTCAACAGGAGAAGGTGGGTGTGGGACGACATGCGTAC
TGA
Protein sequence:
MFMGGGKNLLIDILQVFDKIIHIGATKEIGTALTRVCLRHRAIETRMKTFISTLMERLIA
PLSERADEWRRGCNVTGALSREHARECKRARAELRRRVHDAQRHARKARRTNPDVKRRAD
VCLQDIQERKQQLEEMEEKAVKAALIEERSRFCNFVSLLSPVVESEVAMLAEVSHLQEGT
EQLSRQISEPRSLPPGSLQVICDIKSCYSGWAEGGSVPPSPSTSRLGSRKSSLTSISSLS
SQCSDQHGVSGSTVSCSTPISTGSSIAPALDSQRGQSTSRLASVCSSDSGFRSQDTLQRP
SLYVDNGSDNQSINSECATPSKTNDENDSNDLTSNSASATWPDLKDTAQFERAASAIMGG
RPHTISAGTDRSFQRPALSVHTFSENAREGIYARPPLPTGSDNQSINSECATPSKTNDEN
DSNDLTSNSASATWPDLKDTAQFERAASAIMGGRPHTISAGTDRSFQRPALSVHTFSENA
REGIYARPPLPTRCSSLERPSVPARNSNSTRAEFKPNKPTSLPPHLAKEVPQALYVNMSE
LATMAASRAQQQNSTEYPQQEKRCSSLERPSVPARNSNSTRAEFKPNKPTSLPPHLAKEV
PQALYVNMSELATMAASRAQQQNSTEYPQQEKVGVGRHAY