| New model in OGS2.0 | DPOGS212645 |
|---|---|
| Genomic Position | scaffold3254:- 10107-10869 |
| See gene structure | |
| CDS Length | 420 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 27 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013947 (5e-20) |
| Best Drosophila hit | orthopedia, isoform E (1e-20) |
| Best Human hit | homeobox protein orthopedia (3e-17) |
| Best NR hit (blastp) | Short stature homeobox protein, putative [Pediculus humanus corporis] (4e-25) |
| Best NR hit (blastx) | orthopedia [Tribolium castaneum] (2e-19) |
| GeneOntology terms | GO:0003677 DNA binding GO:0005634 nucleus GO:0003700 sequence-specific DNA binding transcription factor activity GO:0045449 regulation of transcription GO:0007417 central nervous system development GO:0007379 segment specification GO:0003704 specific RNA polymerase II transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0043565 sequence-specific DNA binding |
| InterPro families | IPR001356 Homeobox IPR012287 Homeodomain-related IPR009057 Homeodomain-like |
| Orthology group | ND |
Nucleotide sequence:
ATGGCCACGGTACCCGTCAGCATGTCCTCATCAACGTCAGACAGCGACAAGCCAGCGAAA
CAGAAGAGACACAGAACGAGGTTTACACCGGCGCAGCTAAATGAGTTGGAGCGATGCTTC
ACTAAAACTCATTACCCAGATATATTCATGAGGGAGGAGATAGCCATGCGCATCGGACTG
ACGGAGAGTAGAGTACAGAACGGCACCTTGCGCGCCTCCCTCTTCGCACGTCGCGTACAA
AAGTTGCACTACATTGATACATTTCACGAGGCCTTCTACCTGGAGCGACCTTCGGTCCAC
GTACAAACAGATTTTATGTGGACTCTACGTGTCGAAACACTCTGCGAGTGGAAGATCGTC
GGTGTGGATCGCTTCACTCCGGACGTAACTTTTATGGAGTGTAAAAAGCTGCGGTTGTAA
Protein sequence:
MATVPVSMSSSTSDSDKPAKQKRHRTRFTPAQLNELERCFTKTHYPDIFMREEIAMRIGL
TESRVQNGTLRASLFARRVQKLHYIDTFHEAFYLERPSVHVQTDFMWTLRVETLCEWKIV
GVDRFTPDVTFMECKKLRL