| New model in OGS2.0 | DPOGS205868 |
|---|---|
| Genomic Position | scaffold1809:+ 1126-17507 |
| See gene structure | |
| CDS Length | 3840 |
| Paired RNAseq reads | 4948 |
| Single RNAseq reads | 16162 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000103 (2e-23) |
| Best Drosophila hit | CG30122, isoform D (3e-76) |
| Best Human hit | heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform a (2e-48) |
| Best NR hit (blastp) | GG20960 [Drosophila erecta] (6e-92) |
| Best NR hit (blastx) | GM15464p [Drosophila melanogaster] (2e-87) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0030530 heterogeneous nuclear ribonucleoprotein complex GO:0005524 ATP binding GO:0001906 cell killing GO:0000398 nuclear mRNA splicing, via spliceosome GO:0071011 precatalytic spliceosome |
| InterPro families | IPR003034 DNA-binding SAP IPR018355 SPla/RYanodine receptor subgroup IPR001870 B302/SPRY domain IPR008985 Concanavalin A-like lectin/glucanase |
| Orthology group | MCL14541 |
Nucleotide sequence:
ATGGATCCAGCTAAGATGAAAGTGGTAGATCTAAGATCCGAGCTAGGCGCTCTGGGCTTG
GATACGAAGGGTAACAAACCGGCATTAGTGGAAAGATTGAAAAAGGCTTTGGAAGCTAAA
ACCGGAAAAGCGATACTCGACACAACGATACTTGACACTTCTACCGAGGATGTCGATGAA
CCAGCCACACCGAGAAGAGCCCCGGCAGCCAGAGCTACAAGACTATCTTCATCCTCAAAG
ATATGTCCGACACCAGCTAAGATACCAAGAGAGGATCCTCCAAAACCTATCCAGGAAGAT
CTGAATGAAACGGCACAGGAACCAGAACATAAGGTTGAACCGGTGAAACCTGAACCCACA
ACTGAACCCACCCCTGAAGCCACCCCTGAACCCACCCCTGAACCCACGCCTGAACCAAAC
CAAGAAGTTCCCAAAGAGGAACCGATTCCAGAAGAAATACCAGCTCCCCAGCCGGAACAG
GTGCCGGAGCCGGTCCCACAACCAATTCCAGAACCTGTTCCGGAACCAATTCCAGAACAA
GTGAAAGCAGATACACCACCAGATAACGAACCTAAGTCGGATGAAATGTACAACATTGAC
GACCTAAGCCAATCTCCGATTAATGAAAATAATGATGACAAAGAGACCAACGATGATAGA
GATAACATGGACCAGCAGGAGGAGAGTCAGGAGAGAGATGCCGAGAACACTGAGAATGTA
GAAGAAGACGCTAGAGATGACATGGACGAGAGGAGAGAGTTGTATCTCGAGCACCAGAGA
GAAAAGCAGTTATCGGAACAGGAAGAGTGGGATCTTCTCAACGAGAGATTAGTGCAGAAG
GAGAAAGAGAGAGTTGAGAGGGAAAAGATAGAGGCGGAAGAAGAAGCTAAGAAGATCGAA
GAAATTAGTAAGGATCCCATCAAATTGCAGCGCCTAAAACGCAAACAAGAGAAGAAATCT
CGCTGGACCAACTTCTATAAGGCCGTAGAAGTCACAAATCAAGTCCTCGCTCCGCCGACC
GAGGAACCCCCAGACAGTAAACAGAAGGAGGAAACGGAAACGGTCGTCCCGGAACCGGAA
CTGGATGACAGTAAAGTCACGTTATCATGGTATGACAGCGACCTCAACCAGTACCTAGAG
CTTCCAGAGTTAAATTCAGTGATTCCTCTCAACGAGGGCGCCTTCGCGTACGCCTGGGCC
GGAGCCCGAGCCACGCACGGGGTCACACACGGACGGCTGTGCTATGAGCCTTGGGCATAC
GGGTACGCGACCCCGGATCCTCGAGCCACCACTTTCATACCTCTATCCTCAGTCCATGAA
GGTGGTGTCCTGTACCTCCCCTCATTCCCCTTCCTAACCTCTTTCCCCCCTTCTCTATCT
TTTCCAACTGGCCTGAGAGCTGGATGGTCTACGGACGACACCTCGCTGCATCTGGGTGAA
AATTCACTCAGCTGGGGCTACGAGAGCACCGGCAGAGCTGTGAACAACTCGGAGTTCAAG
GGGTACGGGAAGCAGTTCAACGAGAAAGATGTCATCGGCTGCTACTTGGATCTCGACTCG
ACGCCTTGTACAATGTCGTACACCTTGAACGGCGAAGAACTCGGAACGGCTTTCGAGTTC
GATAAGGAGATATTGGAGGGTAGAGCGGTGTTCCCTCACGTGCTGACGAAAAACATGTGC
TACAAAGTTAACCTGGGATACGATCGATATACCATGCTAACGAAAACTAAAATAGTACGC
AATCGTGTCGAAATACCCATAGAACAAGTTCTAGAAGAGAAGAGAATGAGAGAAGAGAAG
ATCAAGCAGAATAAAGAAGATGTTGTGAAAACCACTATGGAGAAGAGTGACAATGAGAAG
GAGGAAATACAAAAAAGTGAAGAAAATAAAGATGATATACAAGAAAAGAATGATAAGGAA
GATGAGATGGAGGTAGATCAAGATAGAGATAGAGATCTAGAACATGTGAAGAGTGAAAAA
GAAGCAGAAGACAAACAAGAAGATACGGAGACGGAGGCGCAGGGAGATGAGAAAGAATTT
AATGAAAATGGCGAAAAAGCAGAAAAAGCGGTTGCAGATGATGTGACCATGGAGACCAAT
GATGCAGAGGCGGGTTCAGGAAGAGATGAGCATTGTAAGTTTAAGTTATTCACCGACTTA
CAAGCAAGAGGTGCAACGCAACACAGCACACAGACACAGGATGTGGCGTTGCTCTTATAC
ACAGTAGAGGAAGAATTAGACGGACCCGAGGCGAGCGTTCTCCCGGGATACGAGTTCATA
GCCAAGGGTGACCTGGTCGACGGCCCGCGGCGGCCGGGGAGTTGCGACGAGTGTGAGGTC
ATATTGATGGTGGGGATGCCGGGTTCGGGGAAAACCTACTGGGCTAAGCAACATTGTGCC
AAGAATCCCGAGAAAAGATATAATATATTATCAACAGGAGCTTTGTTTGACCGCATGAAG
GTGGATTGTAAGGCGTTCCGTACTGCCTACGAAGGTAAATGGGACGCTATGGTGACTAAG
TGCGCTAAATGCGTCGTCAAGTTACTAGAAATAGCAAAGGGAAGGCGGAGAAACTTCATA
CTCGATCAGACGAATGTATATCCGTCAGCTCAACGTCGTAAACTACGAGAATTCTCCGGC
TATCGTCGTATAGCGGCCGTCGTTGTTGTCAATGAGGAAGACCAGAGACAAAGAGCCGCG
GCCAGAGAGGCGGCTGACGGTAAGGAGGTTCCAGACGCGGCCATATTGGATATGAAAGCG
AACTTCACGTTACCGGAGAAGGGTTCGTTCGTCGATGACGTCATATACACGGAACTCAAT
GAAGAGGAGGCCCGGAAGGTCCTGGACACGTATCACTCCGAGGCAGCGGCGGCCGGCGCT
ATGAAGGAGAGAGACAAGAGAGCGAGGTCCACCTCCAGGGAGATATCAGGGAAGAGGCAG
AGGTCGCCCGAACGAGCGAGGGATCATAGGAGACCCAGGGACCACACCAGAGAGAGAGAT
GATCGTTGGTCCGGAGGTAGTCGTTGGGGTCCACCGGCGCCACGGGGTCGTTGGGGTCGG
GATAGACCCCCGCATCCTAGGTTCGATAGGAATTGGTCACAAAGAAACGATTTTGGTCGC
GATGGCGGTTTCCGTGGCGGTCGTATGGGATCTCGGCAGGATAGAGGTCCGGGGCCTAAC
CTGGGCGGGCCCGGGGGACCTGGGGGTCCGCGCGGGCCTCCTGGGGACCGTTTCCAGAGA
GACCACAGACCCCAGAACAGAGGACCCCCTCATCAACCTGATAAGAGACCGGCAGGGCCG
CCTCCTGGTTCATGGCAGCGAGGTTCCGGGCCACGTGGCGGAGGTCACATGGGGCATGGA
CCAAGACAGGATAACCAGAACCAAAGCCAGAATCACAGCCAAAACCAAAACCAGCAGTGG
AACCAGTGGGCCGGTAACTGGGGAGGCTGGGGTAACTGGAATAATCAAAATCCAGGATGG
AACAACTGGAATAATTGGTGCTGGGGCAACCAGAACTCCGGCCAGGGGCAGGGACAGGTA
CAGGGGCAGGGTCCAGCCGGGAAGGGACCTTCAGGACAGGTACAGGCACAGGCGGGGCAG
GGGCAGGGACAAGGACAGGGCCAGGGTCAGGGTCAGGGCTGGCAGAACTACAATGCACAG
CAATGGTTCCAGTGGCAGCAGTGGCAGCAACAGAACTGGCCCGGGTACGGTCAGCAACAA
CAACAACAGCAACAAGGCGGCGCCAACAGCGGAGATAACGCTCAGGCGTGGGCACAGTTC
TATCAGAACTACGGCGCCGGCAACAACGGGAACTCCAACCCGGCCTTGGAAAAGAAGTGA
Protein sequence:
MDPAKMKVVDLRSELGALGLDTKGNKPALVERLKKALEAKTGKAILDTTILDTSTEDVDE
PATPRRAPAARATRLSSSSKICPTPAKIPREDPPKPIQEDLNETAQEPEHKVEPVKPEPT
TEPTPEATPEPTPEPTPEPNQEVPKEEPIPEEIPAPQPEQVPEPVPQPIPEPVPEPIPEQ
VKADTPPDNEPKSDEMYNIDDLSQSPINENNDDKETNDDRDNMDQQEESQERDAENTENV
EEDARDDMDERRELYLEHQREKQLSEQEEWDLLNERLVQKEKERVEREKIEAEEEAKKIE
EISKDPIKLQRLKRKQEKKSRWTNFYKAVEVTNQVLAPPTEEPPDSKQKEETETVVPEPE
LDDSKVTLSWYDSDLNQYLELPELNSVIPLNEGAFAYAWAGARATHGVTHGRLCYEPWAY
GYATPDPRATTFIPLSSVHEGGVLYLPSFPFLTSFPPSLSFPTGLRAGWSTDDTSLHLGE
NSLSWGYESTGRAVNNSEFKGYGKQFNEKDVIGCYLDLDSTPCTMSYTLNGEELGTAFEF
DKEILEGRAVFPHVLTKNMCYKVNLGYDRYTMLTKTKIVRNRVEIPIEQVLEEKRMREEK
IKQNKEDVVKTTMEKSDNEKEEIQKSEENKDDIQEKNDKEDEMEVDQDRDRDLEHVKSEK
EAEDKQEDTETEAQGDEKEFNENGEKAEKAVADDVTMETNDAEAGSGRDEHCKFKLFTDL
QARGATQHSTQTQDVALLLYTVEEELDGPEASVLPGYEFIAKGDLVDGPRRPGSCDECEV
ILMVGMPGSGKTYWAKQHCAKNPEKRYNILSTGALFDRMKVDCKAFRTAYEGKWDAMVTK
CAKCVVKLLEIAKGRRRNFILDQTNVYPSAQRRKLREFSGYRRIAAVVVVNEEDQRQRAA
AREAADGKEVPDAAILDMKANFTLPEKGSFVDDVIYTELNEEEARKVLDTYHSEAAAAGA
MKERDKRARSTSREISGKRQRSPERARDHRRPRDHTRERDDRWSGGSRWGPPAPRGRWGR
DRPPHPRFDRNWSQRNDFGRDGGFRGGRMGSRQDRGPGPNLGGPGGPGGPRGPPGDRFQR
DHRPQNRGPPHQPDKRPAGPPPGSWQRGSGPRGGGHMGHGPRQDNQNQSQNHSQNQNQQW
NQWAGNWGGWGNWNNQNPGWNNWNNWCWGNQNSGQGQGQVQGQGPAGKGPSGQVQAQAGQ
GQGQGQGQGQGQGWQNYNAQQWFQWQQWQQQNWPGYGQQQQQQQQGGANSGDNAQAWAQF
YQNYGAGNNGNSNPALEKK