| New model in OGS2.0 | DPOGS214693 |
|---|---|
| Genomic Position | scaffold15:- 25996-28309 |
| See gene structure | |
| CDS Length | 1299 |
| Paired RNAseq reads | 246 |
| Single RNAseq reads | 810 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014443 (0.0) |
| Best Drosophila hit | CG16912 (2e-135) |
| Best Human hit | tyrosyl-tRNA synthetase, mitochondrial precursor (2e-91) |
| Best NR hit (blastp) | PREDICTED: similar to tyrosyl-tRNA synthetase [Tribolium castaneum] (1e-149) |
| Best NR hit (blastx) | PREDICTED: similar to tyrosyl-tRNA synthetase [Tribolium castaneum] (8e-145) |
| GeneOntology terms | GO:0004831 tyrosine-tRNA ligase activity GO:0006437 tyrosyl-tRNA aminoacylation GO:0005524 ATP binding GO:0006412 translation GO:0005739 mitochondrion |
| InterPro families | IPR002307 Tyrosyl-tRNA synthetase, class Ib IPR002305 Aminoacyl-tRNA synthetase, class Ib IPR014729 Rossmann-like alpha/beta/alpha sandwich fold |
| Orthology group | MCL13972 |
Nucleotide sequence:
ATGTATCAGGACATGTTCCCAAAAACAGCAGCTAATGAAATATTAGACATATTAAATGGG
TCTCCACAATGTGTGTATGCGGGATTTGATCCAACAGCTAGAAGTCTGCATGTGGGAAAT
CTTTTAGTTATTATCAATCTCCTACACTGGCAGCGCGGTGGACACAATGTGATAGCCTTG
GTAGGAGGAGCCACAGGGTTTATAGGAGATCCAAGTGGTAGAAGTTCAGAGCGAACAGCA
TTACAGGAAGAGATTCTTAGGAAAAATCTAGCTGGTATTAAGAATAATCTAGAAACGGTG
TTTGAAAATCATAAAAAGTACATTTGGACCGAAGATGAGAATAAGTTGAAACCTCCAATA
ATACTTAATAATGAAGAGTGGTACAGAAATATAGATTCAATTAGGTTTGTCAGTGAGATT
GGAAGACATTTTAGGATGGGTACAATGTTGTTAAAGCAATCTGTACAAAACAGAATAAAC
TCTGATATAGGTATGAGCTTCACGGAGTTCTCGTATCAAATATTCCAATCTTATGATTGG
TTGCATCTATTAAACAAATATAATTGTAAATTTCAGATAGGTGGAAGTGATCAGATGGGT
AACATAAGCGCCGGTCATGAACTCATCAGTAGAACAGCAAAGAAAAATGTTTATGGTTTA
ACGTTACCGTTAGTAACGACAGAGGAAGGTGACAAGTTTGGAAAGTCCGCGGGAAATGCA
ATTTGGTTGGATGCAACCATGACAAGCCCATATTCGATGTATCAATTTTTCATAAGGACG
AAAGACAGTGACGTCGAAAAATTATTGAAGTTGCTCACATTTTACAGTTTAGGAGAAATA
AAAGACATAATGTACAAACATACACAACACCCCGAGCAGAGATACCCGCAGCAGTGTCTG
GCTGAACAGTTAGTGACTTTAGTACATGGAGAACCAAAAAAAAAACAGGAAACTAAAACC
TCTTTTCTAAATAATGTTTTATATAATTTCAGTAAAGACGTCAAGTCCTTGGTGTCTCTT
ACATCGACTGAGCTGCAGCAAGTGTTCGAAGGTGCTTCAACTGTACCCCTGCTGCTTTCT
CCGGGTATAACAGTACTGGAACTTGGATTGAAAGCGAAATGTTTCGCTACAGAGGGCGAC
GCTATGAGGATCATCCAAGCCGGAGGTTTTTATATAAATCATCAGAGAATGAAGAAGATC
GATGAAGTCATCACCGAGTCCGCCCACATACTGCCGAATCATACCTCGTTACTACGAGTC
GGCAAACGTAATTACTACATCGTGAAGTGGCAAACATAA
Protein sequence:
MYQDMFPKTAANEILDILNGSPQCVYAGFDPTARSLHVGNLLVIINLLHWQRGGHNVIAL
VGGATGFIGDPSGRSSERTALQEEILRKNLAGIKNNLETVFENHKKYIWTEDENKLKPPI
ILNNEEWYRNIDSIRFVSEIGRHFRMGTMLLKQSVQNRINSDIGMSFTEFSYQIFQSYDW
LHLLNKYNCKFQIGGSDQMGNISAGHELISRTAKKNVYGLTLPLVTTEEGDKFGKSAGNA
IWLDATMTSPYSMYQFFIRTKDSDVEKLLKLLTFYSLGEIKDIMYKHTQHPEQRYPQQCL
AEQLVTLVHGEPKKKQETKTSFLNNVLYNFSKDVKSLVSLTSTELQQVFEGASTVPLLLS
PGITVLELGLKAKCFATEGDAMRIIQAGGFYINHQRMKKIDEVITESAHILPNHTSLLRV
GKRNYYIVKWQT