| New model in OGS2.0 | DPOGS209818 |
|---|---|
| Genomic Position | scaffold1202:- 22143-22931 |
| See gene structure | |
| CDS Length | 540 |
| Paired RNAseq reads | 49 |
| Single RNAseq reads | 359 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008044 (2e-46) |
| Best Drosophila hit | frataxin homolog (9e-33) |
| Best Human hit | frataxin, mitochondrial isoform 1 preproprotein (2e-29) |
| Best NR hit (blastp) | PREDICTED: similar to frataxin, mitochondrial [Tribolium castaneum] (8e-38) |
| Best NR hit (blastx) | PREDICTED: similar to frataxin, mitochondrial [Tribolium castaneum] (1e-35) |
| GeneOntology terms | GO:0005739 mitochondrion GO:0006879 cellular iron ion homeostasis GO:0042542 response to hydrogen peroxide |
| InterPro families | IPR002908 Frataxin-like IPR017789 Frataxin IPR020895 Frataxin conserved site |
| Orthology group | MCL13710 |
Nucleotide sequence:
ATGTACAGGTCCATTATACGTACCAGCCGGTACCTAGTGCGAAGACAAATCAATAATTCT
TTAAAACATACACCATGTTCTATTGCACTTCGTCACAAAGGAGTCCTTGCCTGCAATAAC
ACAATTATTCAACTCTGTATTAGAGGTTCACATAATACTATCTCTTCGGACGGCATTGAA
CCTGCAGTCTTTGAGAAGATTTGTAGTGAAACTTTAGAGTCTCTGTTTGAATATTTTGAA
GTGTTAATAGATCAATCTCCACAACTAAGAGGCGCTGACATAACCTTTAGTGATGGGGTT
TTAACCGTTGCGTTGGGATCCAACTATGGAACGTATGTGATAAACAGACAAACACCAAAC
AAGCAAATATGGTTGAGCTCCCCGGTGTCAGGTCCCAAGCGGTATGACCTCGAACTAAAA
AACGGTGGCTACTGGGTCTACAAGCACGACGGAGTCTCACTTCACAATCTATTACAAAAT
GAAATATCAAAAATAGTAGATAATGTTGATTTTAAAGATTGCGCACATAGTGTAGTGTAA
Protein sequence:
MYRSIIRTSRYLVRRQINNSLKHTPCSIALRHKGVLACNNTIIQLCIRGSHNTISSDGIE
PAVFEKICSETLESLFEYFEVLIDQSPQLRGADITFSDGVLTVALGSNYGTYVINRQTPN
KQIWLSSPVSGPKRYDLELKNGGYWVYKHDGVSLHNLLQNEISKIVDNVDFKDCAHSVV