New model in OGS2.0 | DPOGS215324  |
---|---|
Genomic Position | scaffold2394:- 62478-63891 |
See gene structure | |
CDS Length | 549 |
Paired RNAseq reads   | 71 |
Single RNAseq reads   | 224 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007962 (5e-92) |
Best Drosophila hit   | CG4866, isoform B (2e-68) |
Best Human hit | U3 small nucleolar ribonucleoprotein protein IMP3 (1e-64) |
Best NR hit (blastp)   | PREDICTED: similar to U3 small nucleolar ribonucleoprotein protein IMP3 [Tribolium castaneum] (8e-81) |
Best NR hit (blastx)   | PREDICTED: similar to U3 small nucleolar ribonucleoprotein protein IMP3 [Tribolium castaneum] (2e-78) |
GeneOntology terms    | GO:0019843 rRNA binding GO:0003723 RNA binding GO:0005622 intracellular GO:0003676 nucleic acid binding GO:0030529 ribonucleoprotein complex |
InterPro families    | IPR002942 RNA-binding S4 IPR022801 Ribosomal protein S4/S9 IPR001912 Ribosomal protein S4/S9, N-terminal |
Orthology group | MCL14349 |
Nucleotide sequence:
ATGGTACGAAAATTAAAATTTCATGAGCAAAAATTGCTAAAAAAAGTAGACTTCATATCA
TGGAAAGTCGACAACAATTTAAGCGAGGTTAAGGTTATGAAAAAATTTCACATTCAGAAG
AGAGAAGACTATACAAAGTACAACAAGTTATCCAGAGAAATAAGGGAACTAGCTAACAAA
ATTAAAGACTTAGATGCTAACACAGAATTTAGAACCGAAGCAAGTGCACAGCTTTTAGAA
AAATTATACCAAATGGGACTCATACCAACACGTTGGGATCTGGCTCTCGCTAGTAATGTT
CCAGCCAGTGCCTTTTGTAGACGAAGATTACCTGTGGTTATGGTGAGAAACAAAATGTCA
GAGAATCTCAAAGAAGCTACAAAGTTTATAGAGCAGGGTCATGTGCGTGTTGGTCCGGAG
GTTGTTAAAGACCCAGCATTCCTTGTCACAAGATCTCTCGAGGACTTTGTCACGTGGGTC
GATGGTTCCGCCATCAGGAAGCATGTGATGGAGTATAATGACATGAGGGATGACTTTGAC
ATGTTGTAA
Protein sequence:
MVRKLKFHEQKLLKKVDFISWKVDNNLSEVKVMKKFHIQKREDYTKYNKLSREIRELANK
IKDLDANTEFRTEASAQLLEKLYQMGLIPTRWDLALASNVPASAFCRRRLPVVMVRNKMS
ENLKEATKFIEQGHVRVGPEVVKDPAFLVTRSLEDFVTWVDGSAIRKHVMEYNDMRDDFD
ML