| New model in OGS2.0 | DPOGS216170 |
|---|---|
| Genomic Position | scaffold1113:+ 11959-14853 |
| See gene structure | |
| CDS Length | 1218 |
| Paired RNAseq reads | 400 |
| Single RNAseq reads | 1516 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014155 (2e-92) |
| Best Drosophila hit | quaking related 54B, isoform B (2e-52) |
| Best Human hit | KH domain-containing, RNA-binding, signal transduction-associated protein 2 (9e-36) |
| Best NR hit (blastp) | quaking related [Tribolium castaneum] (2e-90) |
| Best NR hit (blastx) | quaking related [Tribolium castaneum] (4e-72) |
| GeneOntology terms | GO:0003723 RNA binding GO:0005737 cytoplasm GO:0003729 mRNA binding |
| InterPro families | IPR004087 K Homology IPR018111 K Homology, type 1, subgroup |
| Orthology group | MCL14636 |
Nucleotide sequence:
ATGGCAGAAAAGTATGACAAAAATGGTCATAATAGTGATTTTAAAAGAATATCAACGGAA
CAACAAGAAGAACAAGAACATGAACAAGATGGCGAAGAAGGGACAAAATTAAACGAAAAA
GCCGGCGAATATATGCGCGAGCTTCTCAGTGAAAAAATAAAGTTAAATAACGCCAAATTT
CCCGTGTCCTCCAGACTCATTGATCTAGAAGTTGCAAAAGTTCAGTCTTCAGGCAGAATA
CCTCCTAAAGACTTCAAATACTTAGATGTCTACAAGGAAAAGCCTATCAAAGTCACAGTT
AAGGTGTTGGTGCCTATAAAAGAACATCCTAAGATGAATTTTGTTGGTAAACTGCTTGGA
CCTAAAGGTAACACCATGAAACAACTGCAGGAAGAAACAATGTGTAAAATGGCCATACTT
GGCAGAGGATCTATGAAAGACAGAAAAAAGGAAGAAGAACTGAGAAATTCACTAGATCCT
AAATATGCACATTTGTCGGATGAGCTGCATGTGGAAGTGTCAGCATTGGCTCCACCCGCT
GAAGCTTATGCAAGAATCGCATATGCACTGGCCGAAGTGAAGAAATACTTAATACCAGAC
CCTGCCGAGATGTTCCGGCAAGCCCAGATGAGAGATCTCATGGAGAGAGATCACCGGGCG
CCCTTGCTAGATCATCCACAAAAGAACGTGGTATACAGAGCGTGTACAGTCACCAAGAGG
TCTCACTCATACCAGAATCCCGAGCTTAGAATGGCAGGTCCGGTACCACCACATATTCCT
CCAAGACCGGCTGCGCCACCACGAATGCCACCAGCACCTTTGAGGCCGATGCCATCCAAG
TCGAAGGTCTTCAGTATTTTAGACCGAGCCCGTTCCGCTATGGAGTCCAGCTATACATAC
GAAGACCCATATGCTGCCCCGGAACCACCTGTACCACGAGGTCCGCCGCGTGCTGCGCCA
GAACAGGATTACTATTACGATCGTAACCAGGAACGCTTCTACGAAGAGGACGGTGGTTAC
TACAAGGAAGATGGCCGCGATTATAAGGCTTCCGCCAGAGATGTAGGCACACGCCGCCCG
GGACCTTCACAAGGGAGACATTTCACTCACAGGTCCTCCCCGTACGCGCGGGGGGCTAAG
ACACCAGCGAACAAACTTTCACAGTTAATGGTGAGTAATGTTGACAAAACTGAAATCGTA
ACAAATAAAGGCAACTAA
Protein sequence:
MAEKYDKNGHNSDFKRISTEQQEEQEHEQDGEEGTKLNEKAGEYMRELLSEKIKLNNAKF
PVSSRLIDLEVAKVQSSGRIPPKDFKYLDVYKEKPIKVTVKVLVPIKEHPKMNFVGKLLG
PKGNTMKQLQEETMCKMAILGRGSMKDRKKEEELRNSLDPKYAHLSDELHVEVSALAPPA
EAYARIAYALAEVKKYLIPDPAEMFRQAQMRDLMERDHRAPLLDHPQKNVVYRACTVTKR
SHSYQNPELRMAGPVPPHIPPRPAAPPRMPPAPLRPMPSKSKVFSILDRARSAMESSYTY
EDPYAAPEPPVPRGPPRAAPEQDYYYDRNQERFYEEDGGYYKEDGRDYKASARDVGTRRP
GPSQGRHFTHRSSPYARGAKTPANKLSQLMVSNVDKTEIVTNKGN