| New model in OGS2.0 | DPOGS214175 |
|---|---|
| Genomic Position | scaffold49:+ 168265-169209 |
| See gene structure | |
| CDS Length | 945 |
| Paired RNAseq reads | 274 |
| Single RNAseq reads | 824 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005930 (1e-177) |
| Best Drosophila hit | CG17293 (2e-163) |
| Best Human hit | WD repeat-containing protein 82 (2e-128) |
| Best NR hit (blastp) | WD40 protein [Bombyx mori] (0.0) |
| Best NR hit (blastx) | WD40 protein [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0008352 katanin complex GO:0051013 microtubule severing |
| InterPro families | IPR019775 WD40 repeat, conserved site IPR015943 WD40/YVTN repeat-like-containing domain IPR019781 WD40 repeat, subgroup IPR011046 WD40 repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR001680 WD40 repeat IPR020472 G-protein beta WD-40 repeat |
| Orthology group | MCL13607 |
Nucleotide sequence:
ATGAAGCTCGTGGACCAAGTTGTTAGGAGCTTTAAGGTTGCAAAGGTATTTCGAGAAAAT
ACCGACAAAATAAATAGCATTGACTTTTCACCCAGTGGAGAAACTTTAATATCGTGCAGC
GAGGATGATCAAATTGTTATATATGACTGCGAAAAAGGCACGCAAATGATCACAGTTAAT
AGTAAAAAATATGGTGTTGATTTGATACATTTTACCCATGCTAAAAACACTGCTATTCAT
AGCTCGACAAAGGTTGATGACACCATAAGATATTTATCTCTCCATGACAATAAATATATC
AGATATTTTCCGGGCCATACGAAAAAAGTAGTAACACTATGTTTATCTCCTGTGGAAGAC
ACGTTCTTGTCTGGATCTCTGGATAAAACTTTACGTCTTTGGGATTTACGTTCACCAAAT
TGCCAAGGCTTGATGCATTTGTCTGGTCGACCTGTAGCAGCATATGACCCTGAAGGCCTT
ATTTTTGCAGCAGGTGTAAACTCAGAGAGTATTAAACTTTATGACCTAAGATCATTTGAC
AAGGGCCCATTTGTAACCTTTAAATTAAACCAAGAAAAAGAATGTGATTGGACAGGGTTA
AAATTCTCTAGAGATGGTAAGACAATGTTGATAAGTACTAATGGATCTATCATTCGATTA
GTGGATGCATATCATGGCACACCATTACAAACCTTCACTGGTCATTTGAATAATAAAGGA
ATACCAATAGAGGCATCTTTCAGTCCTGATTCTCAATATGTATTCAGTGGATCAACAGAC
GGTAGAGTTCATGTTTGGAATGCTGACACAGGATACAAAGTTTGTGTACTCAATGGTGAC
CATCCGGCCCCAATACAGTGTGTTCAATTTAATCCCAAATATATGTTACTGGCATCGGCG
TGCACTAACATGGCATTCTGGCTACCAACAATAGATGATGTTTGA
Protein sequence:
MKLVDQVVRSFKVAKVFRENTDKINSIDFSPSGETLISCSEDDQIVIYDCEKGTQMITVN
SKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTLCLSPVED
TFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSFD
KGPFVTFKLNQEKECDWTGLKFSRDGKTMLISTNGSIIRLVDAYHGTPLQTFTGHLNNKG
IPIEASFSPDSQYVFSGSTDGRVHVWNADTGYKVCVLNGDHPAPIQCVQFNPKYMLLASA
CTNMAFWLPTIDDV