| New model in OGS2.0 | DPOGS212720 |
|---|---|
| Genomic Position | scaffold3:- 46845-54133 |
| See gene structure | |
| CDS Length | 2328 |
| Paired RNAseq reads | 1457 |
| Single RNAseq reads | 3721 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013125 (5e-11) |
| Best Drosophila hit | CG5245 (6e-50) |
| Best Human hit | zinc finger protein 615 isoform 1 (1e-65) |
| Best NR hit (blastp) | PREDICTED: similar to mCG7830 [Acyrthosiphon pisum] (6e-78) |
| Best NR hit (blastx) | PREDICTED: similar to mCG7830 [Acyrthosiphon pisum] (1e-84) |
| GeneOntology terms | GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0003677 DNA binding GO:0046872 metal ion binding GO:0005622 intracellular GO:0005634 nucleus |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR012934 Zinc finger, AD-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
| Orthology group | MCL19462 |
Nucleotide sequence:
ATGGCTGCCGCTGTTAAAACGCAAAAGTACAACTTTGAGAAGATATGTCGCGCTTGTTTG
CAGATAAAGAAAGATATGAGACCATTGTTCGAACAGCTCACAGCTACCATGTTGATGGGC
ATATCAAAAGTGCAGGTTTCTGTGGGCGACGGTCTTCCGTCCCAGTTGTGTCTGCAATGC
GTGCATCAGATCTCAAGGTGTCACGCCTTCAAGGATCTGGTGGAGAGGAACGACGTGGTC
CTCCGCGAACAGGCGAAAGCAATGGCTGAAGAGACGCTCAAGAAGGATGAGGTGCTCGCG
GAAACGAACCAGTACATCCAGTTTATAGAAGTGCCGAGCCTGAACAACACCGCCAGCCAA
TTACTGGACAGCTTCTTCCCCGAGACCTCCAACGACACCAACGTCACGCAGGAGATATTG
AATAAGGACGACTTCGACGTTGACAAGCTGGAACCTTCCAGTGCAGTGGCCAAGGCGGAG
GAGGCGTTGAATTCAGACGAGGAGAACTATCTCCAGATGGTCGTATTCCAAGCCACTTCA
TCAGTGGCCCCGTTCAGACACGTCTGCAATCTCTGTCAGAAAGAGTTCAAATACGCCAAG
TGGCTGAAGATGCACATGCTGTCTCACTCTAACTGGATCAAAGCGAACTGCAAGAAGCCG
CCGATGTGCCACATATGCGAGAGAACGTTCAAGGGTCCAGGGATGTTGAAGATGCACATG
AGGACCCACGAACAGCGACCTCCTAAACAGCCGACGTGTTCCGTCTGCCAGAGGACCTTC
CCCACCAAGACCTTACTGTATAGACACAGGCAGACACACTTCGAACAGAAGACACACCAG
TGCACGGTTTGCGAGAAGCGGTTCTTCAGCGGGTACGCCCTGAGGTCACATATGGCAAGG
CACAGAGGAGAACGGCCGTACATCTGCTCTATATGCCTCAAGAGCTTCTACAACCCCACC
GATCTGAAGGTTCACTTCCGCCTGCACACCGGCGAGAAGCCGCTCAAGTGTTCCGAATGT
AACAAAACGTTTAGGCGTCACTCTACTTTGTGCCAGCACATGAAGAAGCACAGAGGCATC
AGGAACCACGTGTGCAACATATGTAGCAAGGCCTTCTACGAGGTGTCCAAACTGAACGCC
CACATGAGAGTTCATACCGGCGAGCGTCCGTTCGAGTGTCAGTTCTGTTCGCGTAAGTTC
GCCCAGCAGTCAGCTCTGATCTATCACAAACGGACCCACACAGGGGAGAAGCCTTACGCG
TGTAAGGCGTGCCCCGCCAGGTTCACCACCTCCTCCTCGAGGAACAACCACATGATGACG
CACACCGGCAATAAGAAGTTCGTGTGTCCAGTGTGTTTCAAAGGCTGCACGTCTCGGTCG
GAGCTGCGAGTGCATTCGAGCAAGCACACGGGGGAGAAACTGTTCGCGTGTGAGATCTGC
TCTCAGAGGTTCAGCTCGCCCTCCTACCTCGCTGTGCACAGACGGACGCACACGGGAGAG
AAGAGATATCAGTGCACTGAATGTGGAAAAGGTTTCGTGGAGTGCACCTCATACAAGAAA
CATATGAAGACTCACGCGAAGGACAAACCGCAGAATGAAGAGACGAAGACGCAAAACAAC
CAGGAGGAAGCAGCCAAGCTGCAGGAAACGAGCTTGGAGATAGCTGAAGAAGAGAAGAAA
GAAGACAAAGATGTTACAGCGGAAGCGGAAATAAACCAGGACGGACAAATAGTTATACAA
GATGCCGGTACCCAGAAGAGATTCAAGTGTGGGCTGTGCGTTAAGAGCTACACGTATTTG
CACAGTCTTAAGAAGCACATGCTGAGTCATGTGCAGATGTGCGTGTTCAGTCCGGACGGG
TCGGAGAGGATGTACGCCTTCAAGCAGCAACAGCAGCAGGAGCAGGAGATGCAGCAGCAG
CAGGTGCAGCAGGTGGTGGTGGGCGGGGTGGGGGGAGTGCAGCAGCTAGCGGTGCCCGTC
CACCAGCACGTGCAGCCTCTCGTGCCGCAGAATAACCAACACTATCCGGTTATATCGTCG
GTTCAGCTGCAACAGACACATCAACAAGTTAATACTCAACCACAACTGCAAGTGCAAACG
ATTCAGATACATCCTCAACATCAACCCATACAAATACATGCTGTTGGTGTTCAACAAGAA
CAACTTCACGTGGCCACTAGCAGTTGTCAGACAATGGTGCCCAATATCCTACAGTTACAG
CCGGGTGCTGTCGTTTCCGGTTTGGGGCAGGAACTGGGTGGTGTCCATCGCATCATATTA
CAGCCACCTCACGCTCACCCCCACGCCCTGTACACTATACACCACTAG
Protein sequence:
MAAAVKTQKYNFEKICRACLQIKKDMRPLFEQLTATMLMGISKVQVSVGDGLPSQLCLQC
VHQISRCHAFKDLVERNDVVLREQAKAMAEETLKKDEVLAETNQYIQFIEVPSLNNTASQ
LLDSFFPETSNDTNVTQEILNKDDFDVDKLEPSSAVAKAEEALNSDEENYLQMVVFQATS
SVAPFRHVCNLCQKEFKYAKWLKMHMLSHSNWIKANCKKPPMCHICERTFKGPGMLKMHM
RTHEQRPPKQPTCSVCQRTFPTKTLLYRHRQTHFEQKTHQCTVCEKRFFSGYALRSHMAR
HRGERPYICSICLKSFYNPTDLKVHFRLHTGEKPLKCSECNKTFRRHSTLCQHMKKHRGI
RNHVCNICSKAFYEVSKLNAHMRVHTGERPFECQFCSRKFAQQSALIYHKRTHTGEKPYA
CKACPARFTTSSSRNNHMMTHTGNKKFVCPVCFKGCTSRSELRVHSSKHTGEKLFACEIC
SQRFSSPSYLAVHRRTHTGEKRYQCTECGKGFVECTSYKKHMKTHAKDKPQNEETKTQNN
QEEAAKLQETSLEIAEEEKKEDKDVTAEAEINQDGQIVIQDAGTQKRFKCGLCVKSYTYL
HSLKKHMLSHVQMCVFSPDGSERMYAFKQQQQQEQEMQQQQVQQVVVGGVGGVQQLAVPV
HQHVQPLVPQNNQHYPVISSVQLQQTHQQVNTQPQLQVQTIQIHPQHQPIQIHAVGVQQE
QLHVATSSCQTMVPNILQLQPGAVVSGLGQELGGVHRIILQPPHAHPHALYTIHH