| New model in OGS2.0 | DPOGS203334 |
|---|---|
| Genomic Position | scaffold6:- 160678-162030 |
| See gene structure | |
| CDS Length | 1353 |
| Paired RNAseq reads | 746 |
| Single RNAseq reads | 2137 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002103 (0.0) |
| Best Drosophila hit | alpha-Tubulin at 84D, isoform B (0.0) |
| Best Human hit | tubulin alpha-3C/D chain (0.0) |
| Best NR hit (blastp) | GL12416 [Drosophila persimilis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to alpha tubulin [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0005525 GTP binding GO:0005874 microtubule GO:0045298 tubulin complex GO:0005200 structural constituent of cytoskeleton GO:0007017 microtubule-based process GO:0051258 protein polymerization GO:0005198 structural molecule activity GO:0007018 microtubule-based movement GO:0003924 GTPase activity GO:0009987 cellular process GO:0000910 cytokinesis GO:0005811 lipid particle GO:0005515 protein binding |
| InterPro families | IPR003008 Tubulin/FtsZ, GTPase domain IPR018316 Tubulin/FtsZ, 2-layer sandwich domain IPR023123 Tubulin, C-terminal IPR002452 Alpha tubulin IPR000217 Tubulin IPR008280 Tubulin/FtsZ, C-terminal IPR017975 Tubulin, conserved site |
| Orthology group | MCL10041 |
Nucleotide sequence:
ATGCGTGAATGCATATCTATTCACGGTGGCCAAGCTGGAGTTCAAATTGGTAACGCTTGC
TGGGAGTTATACTGTTTAGAACATGGAATCCAACCGGATGGACAGATGCCATCTGATAAA
ACCGTCGGCGGTGGTGATGATTCCTTCAACACATTTTTCAGTGAAACGGGTGCTGGAAAA
CACGTCCCGAGAGCAGTTTTTATAGATTTAGAGCCCACTGTGGTTGACGAAGTCCGCACC
GGCACCTATCGGCAACTATTCCACCCAGAACAATTAATAACTGGTAAGGAAGATGCCGCT
AACAATTACGCCAGAGGACATTACACCATCGGCAAAGAAATTGTAGACCTTGTTCTAGAC
AGGGTCCGTAAGTTGGCCGATCAATGCACCGGACTGCAGGGATTTTTGATTTTCCATTCG
TTTGGGGGTGGAACTGGTTCTGGATTTGCCTCTTTACTTATGGAACGCTTGTCAGTAGAC
TACGGCAAAAAATCTAAGCTCGAATTTGCAATATATCCAGCTCCTCAAATATCAACAGCA
GTCGTTGAACCATACAATTCTATATTAACTACACACACTACCTTAGAACACTCCGATGCT
GCCTTCATGGTGGATAATGAGGCTATATACGATATCTGCAGGAGAAATTTAGATATAGAA
CGTCCTACATACACTAATTTGAATCGGTTAATTGGACAGATCGTATCTTCAATCACAGCG
TCTCTGAGGTTTGATGGTGCATTAAATGTTGATCTTACCGAATTCCAAACAAACTTGGTC
CCCTATCCTCGCATTCATTTTCCCTTAGTGACATATGCTCCTGTAATATCTGCAGAGAAG
GCCTACCATGAACAACTTTCCGTGGCTGAAATCACGAATGCATGCTTCGAACCGGCAAAC
CAAATGGTAAAATGCGATCCCAGGCACGGTAAATACATGGCCTGCTGTATGTTGTACCGC
GGTGATGTTGTGCCCAAAGACGTCAATGCTGCTATAGGCACTATTAAGACTAAGCGCACT
ATACAATTTGTCGACTGGTGTCCTACAGGTTTTAAAGTTGGTATCAACTACCAACCACCT
ACCGTCGTGCCTGGAGGGGACTTGGCGAAGGTGCAGAGAGCTGTCTGTATGCTTTCCAAT
ACCACTGCTATTGCAGAAGCTTGGTCTCGTCTTAACCATAAATTTGATCTAATGTATGCC
AAGCGTGCTTTTGTTCATTGGTATGTCGGTGAGGGTATGGAAGAGGGAGAGTTTTCGGAG
GCTCGCGAGGATTTGGCTGCTTTAGAGAAGGATTACGAAGAAGTTGGCATGGACTCCGGA
GAAGGGGAGGGCGAGGGTGGAGAAGAATATTAA
Protein sequence:
MRECISIHGGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGK
HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RVRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQISTA
VVEPYNSILTTHTTLEHSDAAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIGTIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGMDSGEGEGEGGEEY