New model in OGS2.0 | DPOGS213730  |
---|---|
Genomic Position | scaffold3849:- 1708-17364 |
See gene structure | |
CDS Length | 2838 |
Paired RNAseq reads   | 105 |
Single RNAseq reads   | 290 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011528 (0.0) |
Best Drosophila hit   | CG3822 (0.0) |
Best Human hit | glutamate receptor, ionotropic kainate 2 isoform 1 precursor (0.0) |
Best NR hit (blastp)   | PREDICTED: similar to CG3822 CG3822-PA [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to CG3822 CG3822-PA [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0015277 kainate selective glutamate receptor activity GO:0006811 ion transport GO:0016020 membrane GO:0004970 ionotropic glutamate receptor activity GO:0005234 extracellular-glutamate-gated ion channel activity |
InterPro families    | IPR001320 Ionotropic glutamate receptor IPR019594 Glutamate receptor, L-glutamate/glycine-binding IPR001828 Extracellular ligand-binding receptor |
Orthology group | MCL10030 |
Nucleotide sequence:
ATGTATCGCTGTACGTCTCAACACGTCAGAATGACAGGAACGAAAGCTTTACTATTAGTG
CTCTTGATTGGACATTTGTCCGCCCTACCGGACACAATTCGTATCGGAGGTCTCTTCCAC
CCTGAGGATGATAAACAAGAGGTTGCATTTCGTTACGCTGTTGAAAGGGTAAACGCTGAC
CGCGCTGTCCTTCCCAGAGCCAAATTACTAGCTCAAGTTGAAACAATATCTCCGCAAGAC
AGTTTCCACGCGTCCAAAAGAGTATGCCACCTTCTTCGAAGTGGAGTGGCGGCTATATTT
GGCCCCCAATCTGCTCCAGCGGCTGCCCACATCCAATCCATCTGTGATACAATGGAACTG
CCCCATCTGGAGACGAGATGGGATTATCGAACGCGACGTGAATCCTGTCTTGTCAACTTG
TATCCTCACCCAGCTGCTTTGAGTCGGGCGTACGTTGATCTCGTACGAGCTTGGGGATGG
AAGTCATTCACTATAGTATACGAGAACAGTGATGGATTGGTTCGTTTACAAGAACTATTG
AAAGCCCATGGTCCATCAGAATTACCTGTTGCTGTCCGACAACTACCAGATTCATATGAC
TACAGGCCGCTATTGAAACAAATAAAGAACTCGGCCGAGTCTCATATAGTACTTGACTGC
GCTACTGAGAGGATTAGGGATGTGCTTCAACAAGCACAGCAGATCGGAATGATGTCGGAT
TATCACAGCTACCTTATAACGTCGTTGGACTTACATAGCGTAGATTTAGAGGAATTTAAA
TATGGCGGTACAAATATAACCGCGTTGCGCCTTCTCGATCCCGAACGAGCCGAGGTACAA
AGAGTCGTTCGAGATTGGGTTTACGACGAAGCCAGAAAGGGAAGGAAGCTGCAACTAGGG
CACACATCGGCTAAGACTGAAACCGCTTTAATATACGATGCGGTTCATTTATTTGCGAAA
GCGTTACACGACCTTGACACTTCGCAACAAATCGATGTAAGACCCTTGTCATGCGAAGCC
GAAGACACATGGCCCCACGGGTACAGCCTCATTAACTACATGAAAATCGTCGAAATGAGG
GGCTTAACAGGAGTTATAAAGTTTGACCACCAGGGGTTCAGAAGTGATTTTACTCTCGAT
ATCATTGAACTAACTAGAGATGGACTTCAGAAAGCCGGTGTTTGGAACTCTTCGGAGGGT
GTCAATTACACGAGATCTTACGGAGATAACCAAAAACAAATAGTCGAGATACTTCAAAAC
AAAACCCTTGTCGTCACAACGATCTTGAGCGCTCCATATTGCATGCGGAGAGAAGCGAGC
GAAAAATTGACAGGCAACGCTCAGTTCGAAGGCTACGCTGTTGATCTCATTCATGAGATA
TCTAAAATTCTGGGTTTCAATTACACATTCAAGCTTGCGCCCGACGGTCGATACGGGTCT
TACAACAGGGAGACTAAAGAGTGGGATGGCATGATCAGGGAACTGCTCGAACAGAGAGCT
GATGTTGCTATAGCTGATCTCACAATAACGTATGACAGGGAACAAGTGGTAGACTTCACG
ATGCCCTTCATGAATCTTGGCATCTCAGTGCTCTACCGCAAACCTATTAAGCAGCCTCCA
AACTTATTCTCATTCCTGTCACCCCTCTCCCTTGATGTATGGATATATATGGCCACGGCG
TACCTGGGCGTCTCTGTACTGCTATTCATTTTAGCCAGGTTCACTCCATACGAATGGCAT
CAAACGCATACGCCGGACGGAGAAAAAATGGAAAATATTTTCTCCCTCTCCAACTGCTTG
TGGTTTGCAATTGGATCTCTTATGCAGCAAAGTTGTGACTTTTTACCCAAGTTCAGCCCG
TACGAGTGGGACAGCCCCCGGAACTGTCTAGACGAGCCGCAGGTGTTGGAGAATCAGTTC
ACACTGTTGAACTCGCTGTGGTTCACAATCGGATCCTTGATGCAGCAAGGTTCGGATATC
GCACCGAAAGCGGTGTCAACAAGGATGGTGGCAGGAATGTGGTGGTTTTTCACTTTGATC
ATGATATCTTCATATACTGCTAACTTGGCCGCATTCCTGACAGTGGAACGTATGGACTCA
CCCATTGAAAGCGCCGAAGATTTGGCCAAGCAAACAAAAATTAAATATGGTGCCCTTAAA
GGAGGATCTACAGCAGCTTTCTTTAGGGATTCAAATTTTTCGACATACCAACGGATGTGG
TCGTTCATGGAGTCGGCTCGACCTTCGGTATTCACAAGCAGCAATAAAGAGGGGGAAGAG
AGGGTTATGAGGGGGAAAGGTGCTTATGCATATCTCATGGAGTCCACCACCATAGAGTAT
GTTGTGGAAAGAAACTGTGACCTCACTCAAGTAGGGGGCATGTTGGATTCCAAAGGATAT
GGCATTGCTATGCCACCCAATTCACCTTACCGTACCGCTATAAGCGGTGCTGTTTTGAAG
TTACAAGAGGAGGGTAAACTTCACATATTAAAAACAAAATGGTGGAAAGAGAAACGCGGC
GGAGGATCGTGTAGAGATGAAACATCAAAGTCCTCATCCACCGCCAATGAGTTGGGTTTG
GCGAACGTGGGCGGCGTGTTTGTTGTTTTGATGGGCGGCATGGGCGTCGCCTGTGTAATC
GCTGTCTGCGAATTTGTATGGAAATCAAGGAAAGTCGCTGTTGATGAACGGGCGTCTCTT
TGTTCGGATATGGCCTCTGAGCTGCGTTCCGCTTTGAAGTGTCCGAGTGGAGCCGGCGGG
GGCTCTGGGGGGGCGAGAGAGGGAGCGGATTCCCCCTACTTGCATTACGGTTTTAGTACT
AAGAGCCAGCTACACTAA
Protein sequence:
MYRCTSQHVRMTGTKALLLVLLIGHLSALPDTIRIGGLFHPEDDKQEVAFRYAVERVNAD
RAVLPRAKLLAQVETISPQDSFHASKRVCHLLRSGVAAIFGPQSAPAAAHIQSICDTMEL
PHLETRWDYRTRRESCLVNLYPHPAALSRAYVDLVRAWGWKSFTIVYENSDGLVRLQELL
KAHGPSELPVAVRQLPDSYDYRPLLKQIKNSAESHIVLDCATERIRDVLQQAQQIGMMSD
YHSYLITSLDLHSVDLEEFKYGGTNITALRLLDPERAEVQRVVRDWVYDEARKGRKLQLG
HTSAKTETALIYDAVHLFAKALHDLDTSQQIDVRPLSCEAEDTWPHGYSLINYMKIVEMR
GLTGVIKFDHQGFRSDFTLDIIELTRDGLQKAGVWNSSEGVNYTRSYGDNQKQIVEILQN
KTLVVTTILSAPYCMRREASEKLTGNAQFEGYAVDLIHEISKILGFNYTFKLAPDGRYGS
YNRETKEWDGMIRELLEQRADVAIADLTITYDREQVVDFTMPFMNLGISVLYRKPIKQPP
NLFSFLSPLSLDVWIYMATAYLGVSVLLFILARFTPYEWHQTHTPDGEKMENIFSLSNCL
WFAIGSLMQQSCDFLPKFSPYEWDSPRNCLDEPQVLENQFTLLNSLWFTIGSLMQQGSDI
APKAVSTRMVAGMWWFFTLIMISSYTANLAAFLTVERMDSPIESAEDLAKQTKIKYGALK
GGSTAAFFRDSNFSTYQRMWSFMESARPSVFTSSNKEGEERVMRGKGAYAYLMESTTIEY
VVERNCDLTQVGGMLDSKGYGIAMPPNSPYRTAISGAVLKLQEEGKLHILKTKWWKEKRG
GGSCRDETSKSSSTANELGLANVGGVFVVLMGGMGVACVIAVCEFVWKSRKVAVDERASL
CSDMASELRSALKCPSGAGGGSGGAREGADSPYLHYGFSTKSQLH