New model in OGS2.0 | DPOGS215377  |
---|---|
Genomic Position | scaffold183:- 17535-18083 |
See gene structure | |
CDS Length | 549 |
Paired RNAseq reads   | 159 |
Single RNAseq reads   | 824 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012390 (2e-96) |
Best Drosophila hit   | CG9220 (2e-73) |
Best Human hit | chondroitin sulfate synthase 1 (1e-66) |
Best NR hit (blastp)   | Chondroitin sulfate synthase, putative [Pediculus humanus corporis] (5e-80) |
Best NR hit (blastx)   | Chondroitin sulfate synthase, putative [Pediculus humanus corporis] (2e-76) |
GeneOntology terms    | GO:0030206 chondroitin sulfate biosynthetic process GO:0008375 acetylglucosaminyltransferase activity GO:0015020 glucuronosyltransferase activity GO:0032580 Golgi cisterna membrane GO:0016758 transferase activity, transferring hexosyl groups |
InterPro families    | IPR008428 Chondroitin N-acetylgalactosaminyltransferase IPR003378 Fringe-like |
Orthology group | MCL10993 |
Nucleotide sequence:
ATGACCGCGGAACAGTATCTGACTACTAGGGCTAGAGCGGTTTATGAAACCTGGGCTCAA
GATCTACCAGGCAGATTAGCGTTCTTTAGCTCGGAAGTATCGCGGGCCCCGGGTCTGCCT
CTGGTGTCGTTGCGGAACGTCGACGACAGTTATCCTCCGCAGAAGAAGTCATTCATGATG
CTGTTGTATATGTACGAGAATTACGGTGACAAGTTCGAGTGGTTCATGCGTGCGGACGAC
GACGTTTACGTGAGAGGTGACAAGTTGGGGCGGTTCTTGAGATCCGTGGACAGTAGGAAG
CCGCAGTTTATAGGGCAAGCTGGGAGAGGGACCAACTCAGAGAGGGACGCTTTGGCCTTA
GATTACAACGAGAACTTCTGTATGGGAGGGCCTGGAGTGCTGATGTCGCGGGAGACTCTC
CGGCGAGTGGCTCCTCACGTGAAGTACTGTCTGAAGCATCTTTACACGACACACGAGGAC
GTCGAGATCGGCCGCTGTGTCGCCAAATTCGCTGGAGTATCCTGCACCTGGAGCTACGAT
GTAAGTTGA
Protein sequence:
MTAEQYLTTRARAVYETWAQDLPGRLAFFSSEVSRAPGLPLVSLRNVDDSYPPQKKSFMM
LLYMYENYGDKFEWFMRADDDVYVRGDKLGRFLRSVDSRKPQFIGQAGRGTNSERDALAL
DYNENFCMGGPGVLMSRETLRRVAPHVKYCLKHLYTTHEDVEIGRCVAKFAGVSCTWSYD
VS