| New model in OGS2.0 | DPOGS214557 |
|---|---|
| Genomic Position | scaffold1337:+ 3472-20683 |
| See gene structure | |
| CDS Length | 1017 |
| Paired RNAseq reads | 19 |
| Single RNAseq reads | 109 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003219 (2e-99) |
| Best Drosophila hit | glutamic acid decarboxylase 1, isoform C (2e-97) |
| Best Human hit | glutamate decarboxylase 1 isoform GAD67 (1e-72) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP005866-PA [Acyrthosiphon pisum] (2e-112) |
| Best NR hit (blastx) | PREDICTED: similar to Glutamic acid decarboxylase 1 CG14994-PA, isoform A isoform 1 [Apis mellifera] (4e-104) |
| GeneOntology terms | GO:0004351 glutamate decarboxylase activity GO:0006538 glutamate catabolic process GO:0042136 neurotransmitter biosynthetic process GO:0007528 neuromuscular junction development GO:0008345 larval locomotory behavior GO:0009449 gamma-aminobutyric acid biosynthetic process GO:0045213 neurotransmitter receptor metabolic process GO:0007416 synapse assembly GO:0030170 pyridoxal phosphate binding GO:0009612 response to mechanical stimulus |
| InterPro families | IPR015424 Pyridoxal phosphate-dependent transferase, major domain IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 IPR002129 Pyridoxal phosphate-dependent decarboxylase |
| Orthology group | MCL11223 |
Nucleotide sequence:
ATGTCAAAGCTGACTTTGGACGGCTTTTTTTCCTACTGCAAGCAAATAGCTGAACACATC
CAGTTGGGCGAAAGAATGGCTTCCTTGTCAGGACAAAGTACCCCCAAACTGACGTCTGGT
GTTGGCAACCTGTATTACGATTCGATCCTGCCATACAGAGAGGATGCCGGCCCCCAAACA
CGTGAGTTCCTCGCCAGGGTTGTGGACGTGTTGCTGGACTTCATACAGAAAGTCAATGAC
AGGGATGAAAAGATCTTGGAGTTCAAGATGCCTGAGGAGATGCAGAAAGTGCTGGACCTG
CATCTGCCCGACGAACCGCTGCCGTTGAAACAACTTCTAGAAGACTGCAAGGTCACATTG
AAACACCAGGTCAAGACCGGTCATCCCCACTTCTTCAACCAACTATCCTGTGGCCTGGAC
ATCATTTCTTTAGCTGGAGAGTGGCTTACTGCTGCTGCCAATACAAACATGTTCACGTAT
GAGATCGCTCCCGTGTTCATTCTGATGGAGAATGTGGTTCTGGAGAAGATGAGGGCGATG
ATTGGTTGGAAAACAGGAGATTCTATCTTGGCACCAGGTAAATACAGCCTGGTGGCTCTG
TGTCCAATTTATATGCTTTTCTTGGCGGCTCGTCATCATAAGTTCCCGCAGTACAAGGAA
AAGGGCCTGACCAGTATTCCTGGACACCTGGTCATGTTTACCTCTGATCAGTGCCATTAC
TCTGTGAAATCCTGTGCATCTGTGTGCGGATTGGGCACAGACTACTGTGTGTGCGTGCCC
AGTGACGAGCGTGGCAGAATGATACCAACTGAGTTGGAGCGTCTCGTCAGATATCACAAG
GACAGAGGACATGTGCCGTTCTTCGTGAACGCCACTTCTGGTACCACGGTGCTGGGAGCA
TTCGATCCGCTCATGGAGATAGCTGACATCTGTGAAAAATATGATATGTGGATGCATGTT
GATGTTCTCACAGTAAGAACTGACGTGCCAACATTCACATCAGCTGATCCCAGATAG
Protein sequence:
MSKLTLDGFFSYCKQIAEHIQLGERMASLSGQSTPKLTSGVGNLYYDSILPYREDAGPQT
REFLARVVDVLLDFIQKVNDRDEKILEFKMPEEMQKVLDLHLPDEPLPLKQLLEDCKVTL
KHQVKTGHPHFFNQLSCGLDIISLAGEWLTAAANTNMFTYEIAPVFILMENVVLEKMRAM
IGWKTGDSILAPGKYSLVALCPIYMLFLAARHHKFPQYKEKGLTSIPGHLVMFTSDQCHY
SVKSCASVCGLGTDYCVCVPSDERGRMIPTELERLVRYHKDRGHVPFFVNATSGTTVLGA
FDPLMEIADICEKYDMWMHVDVLTVRTDVPTFTSADPR