| New model in OGS2.0 | DPOGS202849 |
|---|---|
| Genomic Position | scaffold30:+ 16984-18814 |
| See gene structure | |
| CDS Length | 741 |
| Paired RNAseq reads | 239 |
| Single RNAseq reads | 752 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010488 (5e-88) |
| Best Drosophila hit | CG4980 (3e-53) |
| Best Human hit | pre-mRNA-splicing factor SPF27 (4e-38) |
| Best NR hit (blastp) | splicesome protein, putative [Aedes aegypti] (8e-68) |
| Best NR hit (blastx) | AGAP002305-PA [Anopheles gambiae str. PEST] (6e-60) |
| GeneOntology terms | GO:0005681 spliceosomal complex GO:0071011 precatalytic spliceosome GO:0071013 catalytic step 2 spliceosome GO:0000398 nuclear mRNA splicing, via spliceosome |
| InterPro families | IPR008409 Breast carcinoma amplified sequence 2 |
| Orthology group | MCL14575 |
Nucleotide sequence:
ATGTCTGGAGAGGTGATAGTAGACGCACTACCGTACATTGATCAAGGATACGATGATCCG
GGTGTCAGAGAAGCGGCCTTGGCCATGGTTGAAGAGGAATGTCGTAGATACAGACCCACG
AAAAATTATCTAGAAAATGCTGGTCCGGAGCCCAGCACAGCTTTCGAGACAGCAGCTCTA
CAGAGAGAAATGGAGCGGGTACAACAACGCCTGCCAATGGAACCATTATCAATGAAAAGG
TATGAACTTCCCCCTCCTCCTGTTGGTCGTCTCGGTGAGCCCACAGCGTGGGCGGAGGCA
GTAGATAACTCCCACGCCCAGCTGTCCCACCAAGCGACGCGCGTCCTGAACCTGGAACTC
CAACTACAGTACAGCACTGAGGCATGGCGGTCATATTTACATGTCCTCCAAGCATTGGTC
GTGAAGTCACAAAATGTTCATGCGCAGTTAAGGAAACAAATAGCAGCGGTGAACTGGGAA
CGTAAACGGTCACAGACGGCCAGCGGCGCTCGGCTGAGGGCGCTCCGCCGGCGGTGGGCA
CAGCTCGTAGCAGACAACTACAGGCTAGAGCGAGCCCTGTTGCAACTACAACAACAGAGA
GAGAAGGCAAAAGGACAAACTACAGCGGATGATGAAACTCCCGATATGGATATGGAAGCC
GTTAAAAATCTACCCGACAAGCTCAATTCTGAGACTGAAAAAGAAGTGCAAAAGAAAATA
GAAGACATGTTTGCTGATTAA
Protein sequence:
MSGEVIVDALPYIDQGYDDPGVREAALAMVEEECRRYRPTKNYLENAGPEPSTAFETAAL
QREMERVQQRLPMEPLSMKRYELPPPPVGRLGEPTAWAEAVDNSHAQLSHQATRVLNLEL
QLQYSTEAWRSYLHVLQALVVKSQNVHAQLRKQIAAVNWERKRSQTASGARLRALRRRWA
QLVADNYRLERALLQLQQQREKAKGQTTADDETPDMDMEAVKNLPDKLNSETEKEVQKKI
EDMFAD