| New model in OGS2.0 | DPOGS212094 |
|---|---|
| Genomic Position | scaffold1667:+ 13470-22755 |
| See gene structure | |
| CDS Length | 2748 |
| Paired RNAseq reads | 2298 |
| Single RNAseq reads | 5224 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006728 (0.0) |
| Best Drosophila hit | Bre1 (9e-177) |
| Best Human hit | E3 ubiquitin-protein ligase BRE1B (6e-104) |
| Best NR hit (blastp) | PREDICTED: similar to CG10542 CG10542-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0005515 protein binding GO:0008270 zinc ion binding GO:0016570 histone modification GO:0007422 peripheral nervous system development GO:0006911 phagocytosis, engulfment |
| InterPro families | IPR001841 Zinc finger, RING-type IPR013083 Zinc finger, RING/FYVE/PHD-type IPR017907 Zinc finger, RING-type, conserved site |
| Orthology group | MCL11754 |
Nucleotide sequence:
ATGTCTAAGAGAATTGCGGAAGAGAGTGGAAATGGCAGCAGTCAACCGCCGATTAAGAAG
GTTCATTTCGAGCCACACCTTATTGGCCCTGTATCTACTCTTGAAGAAATGGACATTAAA
GTCCTTCAATTCCAGAACAAAAAGTTAGCACAGAGGATTGAACAAAGACACAGGTGTGAA
GCTGAACTGAGAGCAAGGATTGAGCAGTTAGAAAAACGTCAGACACAGGATGATGCTGTG
CTATGTGTCGTCAACCGTTATTGGAATTTACTGAATGAGGATATTAGAGTATTATTGCAG
AGATTTGACGCAGAGACTGCTGATGAATCCGAAAATAAAAATGAGAATGAAGCTACCACT
TCATTTCTTATGCAATTGTCCACTTGGGATAAAGAGGAGTTGGACGCACAATTGGCCAAT
AGAGTGCAAGTAAGCAAACGTGCGGTTGCAAAGGTTTTGCAAGCTTTTGATAGACTACAG
CAGAGAAATGATAAAATATGGAGAGCTATCAAAGGGGAAAGCGAGGAGAGTGCACCAGCC
CCATCCCTGGATGAAGTTATCCGAGCAACAAATGAGGAAGTTACAGTGGAGAATCGTCGT
TTACAAGCATTATGCACAACTCTGCATGAAAGCCATCATGCTATGACTCTACGAGTGGCA
CAGTTACAGGATGCAGTGAACAGTAGGGACACAGAGAATGCTGAGCTCAAGAACCAAATT
GATGATCTTCAGTATGAGCTGATGAAGGTACGTTCGCGCAATGACAAGTTAGAAAATCAT
TTAGCTGAGGCTATAGAGAAGCTGAAGAGCTATCACCAGTCCGGTACAACTGTGAGTGCT
AGTGTGGCCGCGCCCTGCCCTCCACACTCAGCTGCCAGTGCCAAATTGGAGGATGTGGCT
GCCGAGCTTGAAGAGCAACGTGAGTTGGCCAACAACAGGCTGGCTGAGTTAGACCGTCTG
CACAGACAGCATAGAGACACTCTCAAGGAGTTGGAGAAGCTTAAAATGGATATTCGCCAG
TTGCCAGAATCTGTTATAGTAGAGACCACAGAGTACAAGTGTCTTCAAAGTCAGTTCTCC
GTTCTATATAACGAGTCCATGCAAATGAAGACCGCGCTAGATGAGACACGGCTTCAGCTA
CAGAACGCCAAAAATCTCCACATGAGGCAAATTGAGATGATGGAGAGTGAAGAGCTCGCA
AGGCAGAAGGCTTTAAGGGCTGAAATGATACAGCTAGAAGATGTGCTCGGTCAGCTGAGG
AAAGAGTATGAGATGCTGAGAATAGAGTTTGAACAGAATCTAGCAGCTAATGAGCAGACT
GGACCAATTAATAGAGAAATGAGGCATCTCATTACATCTCTACAGAATCATAACCAACAG
CTGAAAGGAGAGGTACATAGGTATAAAAGAAAGTATAAGGACACCAGCCAAGAATTAAAT
AAGATCCGCAAGGAGCTCGAAGACGCCACCAGCCGTGTGGGATCTGGACCTCATCCGCCA
CCAGAGACCGATGAGAAGCCTGTGGTGAAGAAAGAAGAACCCGAGCCGGAGGGCGATGAA
GGTGGGAGTGGTGGGGAGAACAAGATGGTTGCGGCCACAGCTAATAAAGAGCACGGGAGA
GCCAAGCTACATGAACAGGATTTACTTATTAAGGACCTTAAACAACAGCTTAAAAAAGCA
GTGAACGAGCAAAAGGAATTGAAGCTGTTACTGGACATGTATAAGGGAGTTAGCAAAGAA
CAACGTGACAAAGTGCAGCTCATGGCGGCTGAGAGGAAAGCCAGGATGGAGTTAGAAGAC
CATCGACAGAAAGCCAAGATGGCGCAGGAAAGCAAACGCGAGAGGCGTGTGGCGGACGAG
GACGCGCTTCGTAAGATCAAACAGTTGGAGGAACAGAAGTACGAGCTCCAGAAACAACTA
TCGTGCGCCAGACCCAACAACGACCCGCTCATGGCCTTCCCTAGGCCTTTCGCTGGATCG
CAGGAGGAAGAAGCTTTACTGAACGAGATGGAGGTAACGGGGCAAGCATTTGAAGACATG
CAGGAACAGAATTCCCGGCTCATACAGCAGTTACGGGAGAAAGATGACGCTAATTTCAAA
CTTATGTCGGAAAGAATAAAGGCCAATTCACTGCATAAGTTGCTGCGCGAAGAAAAACAG
CTTTTACAAGAACAGGTGGTGACAAGGGACCAGCAAATAGAGTCGATGGGGCTGGTGGCA
CGGCGGCTTGAGGAAAAAGAACGTCTGTTGCAGAACACTCTGTCAGCGGTGGAGAAGGAG
CTGTTATTACGACAGCAGGCTATGGAAATGCATAAAAGAAAGGCCATAGAGTCCGCACAG
TCAGCAGCTGATCTTAAACTGCATCTTGAAAAATATCACGCACAGATGAAAGAAGCACAG
CAGGTGGTCGCAGAGAAAACCAGCGCGCTCGAGGCGGAGGCTTACAAAACAAAAAGATTA
CATGAGGAGCTGGCGGTGTTACGTCGCAAGGCCGAGCGCATGAAGAAGATGGAACAAGCG
GGTAGTTCCATGGACGAGGTTCTATTAGAAGAAATAAGAGAGTACAAGGAAACTCTCACC
TGTCCTTCATGCAAGGTGAAACGAAAGGATGCCGTGTTGTCCAAGTGCTTTCACGTCTTC
TGCTGGGATTGTCTCCGCACTCGCTATGAGACACGTCAACGGAAATGTCCAAAATGCAAC
GCAGCCTTCGGGGCCAACGACTACCACCGGCTTTATCTTTCCACTTAA
Protein sequence:
MSKRIAEESGNGSSQPPIKKVHFEPHLIGPVSTLEEMDIKVLQFQNKKLAQRIEQRHRCE
AELRARIEQLEKRQTQDDAVLCVVNRYWNLLNEDIRVLLQRFDAETADESENKNENEATT
SFLMQLSTWDKEELDAQLANRVQVSKRAVAKVLQAFDRLQQRNDKIWRAIKGESEESAPA
PSLDEVIRATNEEVTVENRRLQALCTTLHESHHAMTLRVAQLQDAVNSRDTENAELKNQI
DDLQYELMKVRSRNDKLENHLAEAIEKLKSYHQSGTTVSASVAAPCPPHSAASAKLEDVA
AELEEQRELANNRLAELDRLHRQHRDTLKELEKLKMDIRQLPESVIVETTEYKCLQSQFS
VLYNESMQMKTALDETRLQLQNAKNLHMRQIEMMESEELARQKALRAEMIQLEDVLGQLR
KEYEMLRIEFEQNLAANEQTGPINREMRHLITSLQNHNQQLKGEVHRYKRKYKDTSQELN
KIRKELEDATSRVGSGPHPPPETDEKPVVKKEEPEPEGDEGGSGGENKMVAATANKEHGR
AKLHEQDLLIKDLKQQLKKAVNEQKELKLLLDMYKGVSKEQRDKVQLMAAERKARMELED
HRQKAKMAQESKRERRVADEDALRKIKQLEEQKYELQKQLSCARPNNDPLMAFPRPFAGS
QEEEALLNEMEVTGQAFEDMQEQNSRLIQQLREKDDANFKLMSERIKANSLHKLLREEKQ
LLQEQVVTRDQQIESMGLVARRLEEKERLLQNTLSAVEKELLLRQQAMEMHKRKAIESAQ
SAADLKLHLEKYHAQMKEAQQVVAEKTSALEAEAYKTKRLHEELAVLRRKAERMKKMEQA
GSSMDEVLLEEIREYKETLTCPSCKVKRKDAVLSKCFHVFCWDCLRTRYETRQRKCPKCN
AAFGANDYHRLYLST