New model in OGS2.0 | DPOGS213961  |
---|---|
Genomic Position | scaffold330:+ 106220-117042 |
See gene structure | |
CDS Length | 528 |
Paired RNAseq reads   | 83 |
Single RNAseq reads   | 297 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | ND |
Best Drosophila hit   | heparan sulfate 6-O-sulfotransferase (5e-64) |
Best Human hit | heparan-sulfate 6-O-sulfotransferase 1 (2e-20) |
Best NR hit (blastp)   | GL12524 [Drosophila persimilis] (1e-66) |
Best NR hit (blastx)   | GL12524 [Drosophila persimilis] (4e-65) |
GeneOntology terms    | GO:0017095 heparan sulfate 6-O-sulfotransferase activity GO:0007428 primary branching, open tracheal system GO:0008543 fibroblast growth factor receptor signaling pathway GO:0015012 heparan sulfate proteoglycan biosynthetic process GO:0008146 sulfotransferase activity GO:0016051 carbohydrate biosynthetic process GO:0016021 integral to membrane GO:0007424 open tracheal system development |
InterPro families    | IPR010635 Heparan sulphate 6-sulfotransferase IPR005331 Sulfotransferase |
Orthology group | MCL11326 |
Nucleotide sequence:
ATGCATCCAGCCGAAATGCAAAAAAGTGTTTCAGTGCAGGTAGATAGTGATTTTGCCCTT
TTACTGCCCAGTGGTGCTTATGAGATAAAAAAGATGGAGCCAAGATCCAGGTTACGAAAA
GTGATACTGTTCTGTTTACTGCTCTCACTGTTTGGGATGGTGGCATTTGGATACTTTTGC
CCCGATCAGGTGTGTGCATTATCACCGCGAGAGAGAGTAGCAGAATCCTTGGCGCTGACA
TACGCGGAGGCTCCGGGGCGGCCGCTGCCGGATGTGATATCACAGCCTGGTCTATCATAC
GACGAGGTCCTTCACGATGACTTCCGGTTTGATCTGAACGCTCATGACGTCATGGTGTTT
TTGCACATACAGAAGACGGGGGGAACGTCTTTTGGAAGGCACTTGGTTATGGATCTAGAT
TTGAAGAGGCCGTGCAACTGTCAGCGGGCTCGAAAACGTTGCCATTGTTTTCGGCCTCAC
AGCAACGAAATATGGCTTTTTTCGAGATACTCCACTGGCTGGAAGTGA
Protein sequence:
MHPAEMQKSVSVQVDSDFALLLPSGAYEIKKMEPRSRLRKVILFCLLLSLFGMVAFGYFC
PDQVCALSPRERVAESLALTYAEAPGRPLPDVISQPGLSYDEVLHDDFRFDLNAHDVMVF
LHIQKTGGTSFGRHLVMDLDLKRPCNCQRARKRCHCFRPHSNEIWLFSRYSTGWK