| New model in OGS2.0 | DPOGS211109 |
|---|---|
| Genomic Position | scaffold686:+ 25424-28656 |
| See gene structure | |
| CDS Length | 1740 |
| Paired RNAseq reads | 2818 |
| Single RNAseq reads | 6936 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002984 (0.0) |
| Best Drosophila hit | Lysyl-tRNA synthetase, isoform A (0.0) |
| Best Human hit | lysyl-tRNA synthetase isoform 2 (0.0) |
| Best NR hit (blastp) | GH17710 [Drosophila grimshawi] (0.0) |
| Best NR hit (blastx) | lysyl-tRNA synthetase [Culex quinquefasciatus] (0.0) |
| GeneOntology terms | GO:0006430 lysyl-tRNA aminoacylation GO:0004824 lysine-tRNA ligase activity GO:0003676 nucleic acid binding GO:0005737 cytoplasm GO:0005524 ATP binding GO:0005875 microtubule associated complex |
| InterPro families | IPR018149 Lysyl-tRNA synthetase, class II, C-terminal IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like IPR002313 Lysyl-tRNA synthetase, class II IPR012340 Nucleic acid-binding, OB-fold IPR006195 Aminoacyl-tRNA synthetase, class II IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) IPR004365 Nucleic acid binding, OB-fold, tRNA/helicase-type IPR016027 Nucleic acid-binding, OB-fold-like |
| Orthology group | MCL12591 |
Nucleotide sequence:
ATGGCAGAAGCCCCGAGTGAAAAAATATCTAAAAATGAACTGAAACGTCGGCTCAAAGCT
GAACAAAAATTAAAAGAAAAAGCGGAGAAAGTTGCTCAACAACCTGTAGCTGCTGCGGAA
AAAAAATCCACTAAAGCTGAGGAAGAAATCAGTCCGAATGAGTATTACAAATTGCGTTCT
GGCGCGATCGCCGCTTTGAAAAATGGTTCCAAAGCAGATCATCCTTACCCCCATAAATTC
AACGTCACATCTTCTTTAGAAGACTTTATTAATAAATATAACGACCTAGGCAGCGGTGAA
GTACTTGAAAATGTTAATTTGTCTGTAGCCGGTAGAATTCACTCTATACGAGAATCTGGA
GCTAAACTAATATTTTATGATGTTAGAGGTGAAGGTGTCAAGATTCAGGTGATGGCAAAT
GCAAAAATGTATGAATCGGAAGAGAAGTTCATCACAGATACTGATAAACTAAGAAGAGGT
GATATAATTGGCATTGTTGGACACCCAGGCAAAACAAAGAAAGGGGAATTATCAGTTATT
CCCAAAACTATTAAACTGCTTTCCCCTTGCTTGCATATGTTGCCTCACTTACATTTTGGT
CTTAAAGACAAAGAGACCAGGTTCAGGAAAAGATATTTAGATCTCATTCTCAACGATAAG
GTTCGACAAACATTTTATACAAGAGCTAAGATAATTTCATACATTAGAAGATTTTTAGAC
AATATGGGATTTCTGGAAATTGAAACTCCAATGATGAATATGATCCCTGGGGGTGCTGTG
GCCAAACCTTTCATAACACATCACAATGAACTCGACATGGACCTATATATGAGGATAGCA
CCGGAGTTATACCACAAAATGTTAGTCGTCGGAGGTCTAGATCGTGTGTATGAAATCGGC
AGACAATTCAGGAATGAAGGAATAGATATGACACACAACCCTGAGTTTACGACATGTGAA
TTTTATATGGCTTATGCCGATTATAATGATCTGATCACTATAACTGAAACTATGCTGTCA
GGCATGGTAAAAAGTATTCATGGCACTTACAAAGTCAAATACCATCCCGATGGTCCAGAT
GGTGAAGAGGTGGAAATTGATTTTACCCCACCATTTGCCCGAGTGCCGATGATTGCTACT
TTGGAGAAGGTTTTGAATGTCAAACTTCCACCCGCGGATCAACTCAATACCCCAGAAGCT
AATGAACTACTTAGCAAACTATGTGAAAAACATGAAGTTGAATGCCCACCACCTAGAACA
ACAGCCAGACTGCTGGATAAACTTGTTGGAGAATTTCTTGAAGAGAAATGTATTAACCCG
ACATTCATTTTAGACCATCCACAAATAATGAGCCCCCTGTCCAAATATCATCGTGAGTTA
CCTGGACTCACTGAACGTTTTGAACTATTTGTAATGAAGAAAGAAGTTTGCAATGCCTAT
ACTGAGTTAAATGATCCGGCTACTCAGAGGGAAAGATTTGAACAACAGGCTAAGGATCGT
GCGGCGGGAGATGATGAATCTCCACCCACTGATGAGGCATTCTGTACGGCACTTGAATAT
GGATTGCCTCCAACAGCTGGTTGGGGTCTCGGTGTTGATCGGTTTACCATGTTCTTGACG
GATTCCAACAATATTAAGGAAGTGCTGCTATTCCCTGCCATGAAACCTGATGACCCAAAT
AAACATCATAATGAGGAAGAAGGTGCATCAAACGCACCTGCAAATCAAAACGGTGCTTAA
Protein sequence:
MAEAPSEKISKNELKRRLKAEQKLKEKAEKVAQQPVAAAEKKSTKAEEEISPNEYYKLRS
GAIAALKNGSKADHPYPHKFNVTSSLEDFINKYNDLGSGEVLENVNLSVAGRIHSIRESG
AKLIFYDVRGEGVKIQVMANAKMYESEEKFITDTDKLRRGDIIGIVGHPGKTKKGELSVI
PKTIKLLSPCLHMLPHLHFGLKDKETRFRKRYLDLILNDKVRQTFYTRAKIISYIRRFLD
NMGFLEIETPMMNMIPGGAVAKPFITHHNELDMDLYMRIAPELYHKMLVVGGLDRVYEIG
RQFRNEGIDMTHNPEFTTCEFYMAYADYNDLITITETMLSGMVKSIHGTYKVKYHPDGPD
GEEVEIDFTPPFARVPMIATLEKVLNVKLPPADQLNTPEANELLSKLCEKHEVECPPPRT
TARLLDKLVGEFLEEKCINPTFILDHPQIMSPLSKYHRELPGLTERFELFVMKKEVCNAY
TELNDPATQRERFEQQAKDRAAGDDESPPTDEAFCTALEYGLPPTAGWGLGVDRFTMFLT
DSNNIKEVLLFPAMKPDDPNKHHNEEEGASNAPANQNGA