| New model in OGS2.0 | DPOGS202385 |
|---|---|
| Genomic Position | scaffold2163:- 24875-27332 |
| See gene structure | |
| CDS Length | 978 |
| Paired RNAseq reads | 569 |
| Single RNAseq reads | 2339 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014492 (2e-140) |
| Best Drosophila hit | GDP-4-keto-6-deoxy-D-mannose 3,5-epimerase/4-reductase (3e-100) |
| Best Human hit | GDP-L-fucose synthase (3e-102) |
| Best NR hit (blastp) | PREDICTED: similar to nad dependent epimerase/dehydratase [Tribolium castaneum] (8e-133) |
| Best NR hit (blastx) | PREDICTED: similar to nad dependent epimerase/dehydratase [Tribolium castaneum] (1e-121) |
| GeneOntology terms | GO:0003824 catalytic activity GO:0016853 isomerase activity GO:0055114 oxidation reduction GO:0016491 oxidoreductase activity GO:0008152 metabolic process GO:0044237 cellular metabolic process GO:0005488 binding GO:0050662 coenzyme binding GO:0050577 GDP-L-fucose synthase activity GO:0019835 cytolysis |
| InterPro families | IPR001509 NAD-dependent epimerase/dehydratase IPR016040 NAD(P)-binding domain |
| Orthology group | MCL12259 |
Nucleotide sequence:
ATGAGTGAAGATAAGAGCGTTATACTCGTCACCGGTGGTTCAGGGCTAGTGGGACGAGCA
ATAAGGACTGTTATAGAAGAAGAGAGAAAATTAGACAGTAAACTTGTTAGAAATGAGACT
TGGATTTTTTGTGGCTCCAACGATGGGGATTTGAGAGATAAAGCCCAAACTGAGGCATTG
TTTGAAAAACACAGACCAACTCATGTAATACATTTAGCGGCCATGGTAGGAGGCCTATTT
CACAACATGGCTCATAATTTGGATTTCTTTAGAGAAAACATGTCTATAAATGATAATGTT
TTGAATGTGAGCTACAATTATAAAGTTAAAAAAGTAGTGTCCTGTCTCTCGACATGCATA
TTCCCTGATAAGGTCACCTATCCCATTGATGAGACTATGATACACAATGGTCCACCCCAT
CCATCCAACTATGGCTACAGTTATGCAAAGAGGATGGTTGATATTCTGAACAGAGGGTAT
CACTCTCAACACGGTTGCATGTTCACATCAGTGATACCATGTAATGTTTTTGGACCTCAT
GATAACTTTTCTCTGGAGTCGAGTCATGTCATCCCTGCCTTGATACGGAGAATGGATGAT
ACTATTAAAAAGGGTGAGCCAACCTTCACTGTACTGGGGAGTGGAAAACCGTTGCGCCAG
TTTATCTACTCCCTGGACCTGGCCAAGCTGTTTGTGTGGGTGTTGAGGAATTACAATAGC
GTGGAACCAATCATCTTGTCAGTTGATGAAGAAGATGAAGTCACGATCAGTCGAGTGGCG
GAGGCGATAAAGGAAGCTCACGGTTATCAAGGAGAGATTGTATATGACACAAGCAAGGCG
GACGGACAACACAAGAAAACAGCTTCAAACATGAAACTGAGATCGCTGTACAAAGAATTC
AACTTCACACCTTTTGATAAAGCTATTAAGGATACGGTTGTCTGGTTCAGGGACAACCGA
GACCGAGCTCGGTTATAG
Protein sequence:
MSEDKSVILVTGGSGLVGRAIRTVIEEERKLDSKLVRNETWIFCGSNDGDLRDKAQTEAL
FEKHRPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNVLNVSYNYKVKKVVSCLSTCI
FPDKVTYPIDETMIHNGPPHPSNYGYSYAKRMVDILNRGYHSQHGCMFTSVIPCNVFGPH
DNFSLESSHVIPALIRRMDDTIKKGEPTFTVLGSGKPLRQFIYSLDLAKLFVWVLRNYNS
VEPIILSVDEEDEVTISRVAEAIKEAHGYQGEIVYDTSKADGQHKKTASNMKLRSLYKEF
NFTPFDKAIKDTVVWFRDNRDRARL