| New model in OGS2.0 | DPOGS214068 |
|---|---|
| Genomic Position | scaffold5093:- 804-6743 |
| See gene structure | |
| CDS Length | 576 |
| Paired RNAseq reads | 296 |
| Single RNAseq reads | 1015 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010566 (6e-53) |
| Best Drosophila hit | prolyl-4-hydroxylase-alpha EFB (6e-25) |
| Best Human hit | prolyl 4-hydroxylase subunit alpha-1 isoform 2 precursor (3e-16) |
| Best NR hit (blastp) | prolyl 4-hydroxylase alpha subunit [Bombyx mori] (3e-57) |
| Best NR hit (blastx) | prolyl 4-hydroxylase alpha subunit [Bombyx mori] (1e-55) |
| GeneOntology terms | GO:0016222 procollagen-proline 4-dioxygenase complex GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline GO:0004656 procollagen-proline 4-dioxygenase activity GO:0031418 L-ascorbic acid binding GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GO:0005783 endoplasmic reticulum GO:0055114 oxidation reduction GO:0005506 iron ion binding |
| InterPro families | IPR013547 Prolyl 4-hydroxylase alpha-subunit, N-terminal |
| Orthology group | MCL30558 |
Nucleotide sequence:
ATGGATTCACAATTCAAAGGTCCACCTCATTGTAGGGAGAGGAGCTTCAACCGTGACTGG
GACTTGCGACCCAGGTACAATATGTATAGGGTTAATATTTTTTGTTTATTATCAATATTA
TTGAGCCTGGTGACAACATCACATGGAGAGTTGTTCACTGCGATATCGGACGTAGAACCT
TTATTGGAAACTCATAAGAAGATCATCGACGATTTAGAAGATTACATAAAAAAAGAAGAG
GACAGGTTGCAGGCGTTGAAAAGACACTTGGTTATATACAGACGGGAACATGAGCAAGCT
ATGGAGGATATACCCAACTACCTCGGGAATCCTATAAACGCGTTCACTTTGATAAAGAGA
TTGACCATAGACTTGGACGACATTGAGAAGAGTATTGAAATAGGCACTGAATATATTAAA
AACATAACAATTATAAATAATCACGCGAATGTCAAATATCCAACTTTGGAGGATTTAACT
GGAGCTGCGCAGGCGCTGACAAGATTGCAACAGACATACAAACTAGATGTCAAGGACCTG
TCAGAGGGGAGGCTCAATGGAGTTGTTTACAGGTAA
Protein sequence:
MDSQFKGPPHCRERSFNRDWDLRPRYNMYRVNIFCLLSILLSLVTTSHGELFTAISDVEP
LLETHKKIIDDLEDYIKKEEDRLQALKRHLVIYRREHEQAMEDIPNYLGNPINAFTLIKR
LTIDLDDIEKSIEIGTEYIKNITIINNHANVKYPTLEDLTGAAQALTRLQQTYKLDVKDL
SEGRLNGVVYR